Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RIPK2O43353 FEM1AP1-201ENST00000431297 1995 ntBASIC21.74■■□□□ 1.07
RIPK2O43353 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK2O43353 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.74■■□□□ 1.07
RIPK2O43353 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RIPK2O43353 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK2O43353 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK2O43353 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.74■■□□□ 1.07
RIPK2O43353 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK2O43353 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK2O43353 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK2O43353 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK2O43353 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RIPK2O43353 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK2O43353 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK2O43353 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.73■■□□□ 1.07
RIPK2O43353 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RIPK2O43353 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK2O43353 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RIPK2O43353 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.73■■□□□ 1.07
RIPK2O43353 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.73■■□□□ 1.07
RIPK2O43353 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.73■■□□□ 1.07
RIPK2O43353 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RIPK2O43353 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK2O43353 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
RIPK2O43353 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK2O43353 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK2O43353 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK2O43353 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK2O43353 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.72■■□□□ 1.07
RIPK2O43353 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK2O43353 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.72■■□□□ 1.07
RIPK2O43353 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RIPK2O43353 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK2O43353 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK2O43353 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK2O43353 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK2O43353 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RIPK2O43353 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.71■■□□□ 1.07
RIPK2O43353 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.71■■□□□ 1.07
RIPK2O43353 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.71■■□□□ 1.07
RIPK2O43353 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
RIPK2O43353 AL049796.1-201ENST00000565336 1766 ntBASIC21.71■■□□□ 1.07
RIPK2O43353 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK2O43353 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RIPK2O43353 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.7■■□□□ 1.07
RIPK2O43353 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK2O43353 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RIPK2O43353 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.7■■□□□ 1.06
RIPK2O43353 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RIPK2O43353 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK2O43353 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK2O43353 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK2O43353 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.7■■□□□ 1.06
RIPK2O43353 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK2O43353 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK2O43353 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.7■■□□□ 1.06
RIPK2O43353 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK2O43353 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.7■■□□□ 1.06
RIPK2O43353 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK2O43353 MTDHP2-201ENST00000601468 714 ntBASIC21.7■■□□□ 1.06
RIPK2O43353 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK2O43353 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RIPK2O43353 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK2O43353 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK2O43353 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK2O43353 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK2O43353 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK2O43353 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
RIPK2O43353 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK2O43353 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK2O43353 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.69■■□□□ 1.06
RIPK2O43353 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK2O43353 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.69■■□□□ 1.06
RIPK2O43353 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RIPK2O43353 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK2O43353 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.69■■□□□ 1.06
RIPK2O43353 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK2O43353 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK2O43353 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK2O43353 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
RIPK2O43353 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RIPK2O43353 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.68■■□□□ 1.06
RIPK2O43353 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK2O43353 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK2O43353 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms