Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC01548A6NM66 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LINC01548A6NM66 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC01548A6NM66 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01548A6NM66 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC01548A6NM66 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01548A6NM66 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LINC01548A6NM66 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01548A6NM66 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01548A6NM66 AC055733.4-201ENST00000638462 1354 ntBASIC16.91■□□□□ 0.3
LINC01548A6NM66 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LINC01548A6NM66 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01548A6NM66 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01548A6NM66 ECEL1P1-201ENST00000373592 1742 ntBASIC16.91■□□□□ 0.3
LINC01548A6NM66 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC01548A6NM66 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01548A6NM66 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01548A6NM66 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC01548A6NM66 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.91■□□□□ 0.3
LINC01548A6NM66 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01548A6NM66 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01548A6NM66 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC01548A6NM66 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01548A6NM66 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LINC01548A6NM66 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01548A6NM66 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01548A6NM66 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01548A6NM66 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01548A6NM66 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01548A6NM66 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01548A6NM66 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01548A6NM66 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.9■□□□□ 0.3
LINC01548A6NM66 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.9■□□□□ 0.3
LINC01548A6NM66 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01548A6NM66 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01548A6NM66 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.9■□□□□ 0.3
LINC01548A6NM66 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.9■□□□□ 0.3
LINC01548A6NM66 KRT18P61-201ENST00000585825 1298 ntBASIC16.9■□□□□ 0.3
LINC01548A6NM66 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01548A6NM66 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01548A6NM66 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01548A6NM66 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01548A6NM66 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC01548A6NM66 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC01548A6NM66 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
LINC01548A6NM66 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01548A6NM66 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01548A6NM66 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC01548A6NM66 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LINC01548A6NM66 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
LINC01548A6NM66 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01548A6NM66 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01548A6NM66 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.89■□□□□ 0.29
LINC01548A6NM66 KRT18P5-201ENST00000436075 1291 ntBASIC16.89■□□□□ 0.29
LINC01548A6NM66 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.89■□□□□ 0.29
LINC01548A6NM66 AL034346.1-201ENST00000568244 1277 ntBASIC16.89■□□□□ 0.29
LINC01548A6NM66 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC01548A6NM66 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.89■□□□□ 0.29
LINC01548A6NM66 NTF6G-201ENST00000591094 616 ntBASIC16.89■□□□□ 0.29
LINC01548A6NM66 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.89■□□□□ 0.29
LINC01548A6NM66 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC01548A6NM66 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LINC01548A6NM66 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC01548A6NM66 AP006587.3-201ENST00000525742 1516 ntBASIC16.89■□□□□ 0.29
LINC01548A6NM66 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01548A6NM66 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC01548A6NM66 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01548A6NM66 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms