Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM235A6NFC5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM235A6NFC5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TMEM235A6NFC5 BX664725.1-201ENST00000438252 379 ntBASIC18.22■□□□□ 0.51
TMEM235A6NFC5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.22■□□□□ 0.51
TMEM235A6NFC5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM235A6NFC5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM235A6NFC5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM235A6NFC5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.22■□□□□ 0.51
TMEM235A6NFC5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TMEM235A6NFC5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM235A6NFC5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM235A6NFC5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 AL033527.3-201ENST00000566366 1196 ntBASIC18.21■□□□□ 0.51
TMEM235A6NFC5 AC104564.3-201ENST00000582367 638 ntBASIC18.21■□□□□ 0.51
TMEM235A6NFC5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.21■□□□□ 0.51
TMEM235A6NFC5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
TMEM235A6NFC5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM235A6NFC5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM235A6NFC5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM235A6NFC5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM235A6NFC5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM235A6NFC5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM235A6NFC5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM235A6NFC5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TMEM235A6NFC5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM235A6NFC5 AL499627.2-201ENST00000606283 725 ntBASIC18.2■□□□□ 0.5
TMEM235A6NFC5 AC012354.3-201ENST00000623734 483 ntBASIC18.2■□□□□ 0.5
TMEM235A6NFC5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TMEM235A6NFC5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TMEM235A6NFC5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM235A6NFC5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 AC079089.2-201ENST00000531211 1277 ntBASIC18.19■□□□□ 0.5
TMEM235A6NFC5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
TMEM235A6NFC5 LINC01006-201ENST00000333319 2292 ntBASIC18.19■□□□□ 0.5
TMEM235A6NFC5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TMEM235A6NFC5 AC092667.1-201ENST00000434301 2586 ntBASIC18.18■□□□□ 0.5
TMEM235A6NFC5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms