Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.92■□□□□ 0.62
MBD3L3A6NE82 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3L3A6NE82 AC104771.1-201ENST00000603335 964 ntBASIC18.92■□□□□ 0.62
MBD3L3A6NE82 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.92■□□□□ 0.62
MBD3L3A6NE82 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
MBD3L3A6NE82 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3L3A6NE82 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
MBD3L3A6NE82 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3L3A6NE82 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 SLC7A5P1-201ENST00000568957 537 ntBASIC18.91■□□□□ 0.62
MBD3L3A6NE82 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
MBD3L3A6NE82 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 AC007322.1-201ENST00000426983 750 ntBASIC18.9■□□□□ 0.62
MBD3L3A6NE82 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
MBD3L3A6NE82 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MBD3L3A6NE82 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
MBD3L3A6NE82 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 AL109923.1-201ENST00000618799 583 ntBASIC18.89■□□□□ 0.61
MBD3L3A6NE82 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3L3A6NE82 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD3L3A6NE82 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3L3A6NE82 GPX1P1-201ENST00000388829 606 ntBASIC18.88■□□□□ 0.61
MBD3L3A6NE82 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.88■□□□□ 0.61
MBD3L3A6NE82 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD3L3A6NE82 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD3L3A6NE82 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3L3A6NE82 AC010536.3-201ENST00000620306 533 ntBASIC18.88■□□□□ 0.61
MBD3L3A6NE82 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MBD3L3A6NE82 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD3L3A6NE82 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
MBD3L3A6NE82 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3L3A6NE82 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3L3A6NE82 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.87■□□□□ 0.61
MBD3L3A6NE82 AC005181.1-201ENST00000604782 1256 ntBASIC18.87■□□□□ 0.61
MBD3L3A6NE82 AL050303.2-201ENST00000619798 666 ntBASIC18.87■□□□□ 0.61
MBD3L3A6NE82 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms