Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 AC092667.1-201ENST00000434301 2586 ntBASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 LINC01006-201ENST00000333319 2292 ntBASIC15.12■□□□□ 0.01
TRBV27A0A0K0K1C4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 FEM1AP1-201ENST00000431297 1995 ntBASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV27A0A0K0K1C4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV27A0A0K0K1C4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 AL049796.1-201ENST00000565336 1766 ntBASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 KRT8P33-201ENST00000508125 1423 ntBASIC15.09■□□□□ 0.01
TRBV27A0A0K0K1C4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV27A0A0K0K1C4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
TRBV27A0A0K0K1C4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV27A0A0K0K1C4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV27A0A0K0K1C4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV27A0A0K0K1C4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV27A0A0K0K1C4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV27A0A0K0K1C4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.08■□□□□ 0
TRBV27A0A0K0K1C4 AC092028.1-203ENST00000608262 953 ntBASIC15.08■□□□□ 0
TRBV27A0A0K0K1C4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.08■□□□□ 0
TRBV27A0A0K0K1C4 AC068587.7-201ENST00000641602 218 ntBASIC15.08■□□□□ 0
TRBV27A0A0K0K1C4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TRBV27A0A0K0K1C4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRBV27A0A0K0K1C4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV27A0A0K0K1C4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TRBV27A0A0K0K1C4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV27A0A0K0K1C4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV27A0A0K0K1C4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms