Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-2A0A0B4J235 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 OXCT2P1-201ENST00000447263 1535 ntBASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 FEM1AP1-201ENST00000431297 1995 ntBASIC14.11□□□□□ -0.15
TRAV13-2A0A0B4J235 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAV13-2A0A0B4J235 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 MLEC-202ENST00000412616 841 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV13-2A0A0B4J235 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV13-2A0A0B4J235 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV13-2A0A0B4J235 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms