Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 AL354811.1-201ENST00000610286 706 ntBASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 AL358852.1-201ENST00000623174 1268 ntBASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV2A0A0B4J234 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV2A0A0B4J234 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 AC009237.3-201ENST00000393279 1427 ntBASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 AC012414.1-201ENST00000556676 535 ntBASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV2A0A0B4J234 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 IRS3P-201ENST00000223076 1006 ntBASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 AC105265.2-201ENST00000467189 838 ntBASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV2A0A0B4J234 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 AP004607.7-201ENST00000527152 1677 ntBASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV2A0A0B4J234 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms