Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 AL049796.1-201ENST00000565336 1766 ntBASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-1A0A075B6T8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.08■□□□□ 0.17
TRAV9-1A0A075B6T8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV9-1A0A075B6T8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV9-1A0A075B6T8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
TRAV9-1A0A075B6T8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
TRAV9-1A0A075B6T8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV9-1A0A075B6T8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV9-1A0A075B6T8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV9-1A0A075B6T8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV9-1A0A075B6T8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 AC087289.5-201ENST00000586076 3175 ntBASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-1A0A075B6T8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 AFG3L1P-217ENST00000557444 2447 ntBASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-1A0A075B6T8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 AC060814.1-201ENST00000554326 538 ntBASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 AC026202.3-201ENST00000600805 1127 ntBASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV9-1A0A075B6T8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 AC092296.2-201ENST00000589470 999 ntBASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 RAP2CP1-202ENST00000605179 643 ntBASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms