Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL139005.1-201ENST00000623899 1635 ntBASIC10.73□□□□□ -0.69
P04436 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 UBIAD1-202ENST00000376810 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 RBMY1F-202ENST00000454978 1810 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
P04436 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 MEF2C-213ENST00000508569 1882 ntTSL 5 BASIC10.72□□□□□ -0.69
P04436 AC106820.4-201ENST00000561847 5616 ntBASIC10.72□□□□□ -0.69
P04436 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC10.72□□□□□ -0.69
P04436 CSPG4P12-201ENST00000558282 4853 ntBASIC10.72□□□□□ -0.69
P04436 EPS8-212ENST00000543523 3925 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
P04436 ZC3HC1-202ENST00000358303 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 CLN8-212ENST00000637083 2001 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
P04436 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 CCSER1-209ENST00000509176 5847 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC10.72□□□□□ -0.69
P04436 TP53-202ENST00000359597 1152 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 IGKV3D-20-201ENST00000390270 445 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
P04436 IGLV1-50-201ENST00000390291 405 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
P04436 RPSAP45-201ENST00000401872 874 ntBASIC10.72□□□□□ -0.69
P04436 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC10.72□□□□□ -0.69
P04436 CRPP1-201ENST00000412857 625 ntBASIC10.72□□□□□ -0.69
P04436 IMMP2L-203ENST00000437687 243 ntTSL 2 BASIC10.72□□□□□ -0.69
P04436 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 LINC01210-204ENST00000478772 1288 ntTSL 5 BASIC10.72□□□□□ -0.69
P04436 IGKV3-20-201ENST00000492167 400 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
P04436 LINC01950-201ENST00000505997 602 ntTSL 3 BASIC10.72□□□□□ -0.69
P04436 AC009630.1-201ENST00000523081 559 ntTSL 2 BASIC10.72□□□□□ -0.69
P04436 AC009005.1-202ENST00000588908 625 ntTSL 2 BASIC10.72□□□□□ -0.69
P04436 ZNF766-208ENST00000600821 568 ntTSL 4 BASIC10.72□□□□□ -0.69
P04436 TEX28-201ENST00000610938 1233 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
P04436 AL935212.4-201ENST00000618569 232 ntBASIC10.72□□□□□ -0.69
P04436 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC10.72□□□□□ -0.69
P04436 PROCR-201ENST00000216968 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 DBIL5P-203ENST00000536214 2677 ntBASIC10.72□□□□□ -0.69
P04436 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
P04436 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 RALGAPA2-206ENST00000620717 1432 ntTSL 5 BASIC10.72□□□□□ -0.69
P04436 MED8-201ENST00000290663 1483 ntTSL 5 BASIC10.72□□□□□ -0.69
P04436 WDR70-201ENST00000265107 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 ASS1-201ENST00000352480 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 GTF2A2-202ENST00000396060 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC10.72□□□□□ -0.69
P04436 ARID1B-230ENST00000637810 5073 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 ZFAND5-201ENST00000237937 5310 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
P04436 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
P04436 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC10.72□□□□□ -0.69
P04436 PTPN20-207ENST00000395725 2226 ntTSL 5 BASIC10.72□□□□□ -0.69
P04436 DCTN1-201ENST00000361874 4500 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04436 AL136295.5-201ENST00000558468 4798 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
P04436 AC025279.1-201ENST00000604430 4818 ntTSL 5 BASIC10.72□□□□□ -0.69
P04436 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC10.72□□□□□ -0.69
P04436 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.69
P04436 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
P04436 TMC2-201ENST00000358864 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 ZSCAN22-201ENST00000329665 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 CMKLR1-201ENST00000312143 5283 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
P04436 PTGIS-201ENST00000244043 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 TBC1D15-217ENST00000550746 6184 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 PGM2L1-201ENST00000298198 8515 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 FAM86B2-201ENST00000262365 1268 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
P04436 BEST3-201ENST00000266661 1876 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 C14orf93-201ENST00000299088 3354 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
P04436 LY6D-201ENST00000301263 804 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 OR4A5-201ENST00000319760 1071 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
P04436 KRTAP19-2-201ENST00000334055 380 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
P04436 LILRB3-202ENST00000346401 2204 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
P04436 LINC01561-201ENST00000369071 2176 ntBASIC10.71□□□□□ -0.69
P04436 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC10.71□□□□□ -0.69
P04436 ATP6V1G2-206ENST00000376151 1261 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 SMARCE1-203ENST00000377808 1307 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
P04436 APEX1-202ENST00000398030 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC10.71□□□□□ -0.69
P04436 ZNF438-204ENST00000413025 3106 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
P04436 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC10.71□□□□□ -0.69
P04436 ACTR3-202ENST00000415792 676 ntTSL 3 BASIC10.71□□□□□ -0.69
P04436 AC004231.1-201ENST00000418393 815 ntTSL 5 BASIC10.71□□□□□ -0.69
P04436 ALMS1P1-201ENST00000428767 921 ntBASIC10.71□□□□□ -0.69
P04436 DCTN2-201ENST00000434715 1677 ntTSL 5 BASIC10.71□□□□□ -0.69
P04436 AC007041.1-201ENST00000438989 1155 ntBASIC10.71□□□□□ -0.69
P04436 PLEKHB2-208ENST00000439822 4177 ntTSL 3 BASIC10.71□□□□□ -0.69
P04436 RCBTB2P1-201ENST00000453021 1462 ntBASIC10.71□□□□□ -0.69
P04436 ADH7-204ENST00000476959 1325 ntTSL 2 BASIC10.71□□□□□ -0.69
P04436 SULF2-211ENST00000484875 4238 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 SEMA6A-205ENST00000503865 1678 ntTSL 2 BASIC10.71□□□□□ -0.69
P04436 AP001972.2-201ENST00000529304 216 ntTSL 5 BASIC10.71□□□□□ -0.69
P04436 HCK-208ENST00000534862 1581 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 DYNLL1-211ENST00000552870 595 ntTSL 2 BASIC10.71□□□□□ -0.69
P04436 DPPA5P4-201ENST00000559021 365 ntBASIC10.71□□□□□ -0.69
P04436 MIR4418-201ENST00000581169 62 ntBASIC10.71□□□□□ -0.69
P04436 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04436 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms