Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 HNRNPA1P61-201ENST00000342073 924 ntBASIC12.54□□□□□ -0.4
LMO3Q8TAP4 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 RNA5SP244-201ENST00000390936 112 ntBASIC12.54□□□□□ -0.4
LMO3Q8TAP4 DBI-204ENST00000409094 576 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 AL031663.2-201ENST00000417630 355 ntTSL 2 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 ADH5P2-201ENST00000425922 1124 ntBASIC12.54□□□□□ -0.4
LMO3Q8TAP4 RTN2-203ENST00000430715 1127 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 CDRT15P2-201ENST00000447470 416 ntBASIC12.54□□□□□ -0.4
LMO3Q8TAP4 ZEB2-214ENST00000462355 656 ntTSL 4 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 RN7SL497P-201ENST00000476341 301 ntBASIC12.54□□□□□ -0.4
LMO3Q8TAP4 AC109492.1-201ENST00000503349 602 ntTSL 2 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 LINC01485-204ENST00000522731 614 ntTSL 4 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 TRIT1-215ENST00000541099 545 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 DPPA5P4-201ENST00000559021 365 ntBASIC12.54□□□□□ -0.4
LMO3Q8TAP4 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 AC078880.3-201ENST00000603439 1121 ntBASIC12.54□□□□□ -0.4
LMO3Q8TAP4 CR392039.1-201ENST00000623217 204 ntBASIC12.54□□□□□ -0.4
LMO3Q8TAP4 TNNT3-216ENST00000641119 941 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 RAD51-202ENST00000382643 1588 ntTSL 2 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 AC011479.3-201ENST00000594299 1890 ntBASIC12.54□□□□□ -0.4
LMO3Q8TAP4 AFF4-203ENST00000378595 3348 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 HMOX2-202ENST00000398595 1644 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 CSF3R-202ENST00000361632 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 AC004801.4-201ENST00000546738 3112 ntTSL 2 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 ARMC8-201ENST00000358441 3181 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 ZNF627-204ENST00000588174 2755 ntTSL 2 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 CICP3-201ENST00000440782 2455 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 AP1S2-202ENST00000380291 3492 ntTSL 2 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 CACNB2-208ENST00000377331 1827 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 CSE1L-201ENST00000262982 3553 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 CCT5-203ENST00000503026 1933 ntTSL 2 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 MEP1A-202ENST00000611727 2971 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 CLCN5-203ENST00000376091 3046 ntTSL 2 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 ZNF169-202ENST00000395395 1986 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 UFSP2-201ENST00000264689 1630 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 FOLR1-201ENST00000312293 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 EDNRA-202ENST00000358556 3823 ntTSL 5 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 C19orf38-201ENST00000397820 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 AC096677.3-201ENST00000413162 387 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 AL359510.1-201ENST00000413855 208 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 SPATA3-203ENST00000424440 1011 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 RPL12P45-201ENST00000428087 478 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 ATP5G1P4-201ENST00000430660 441 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 IFT22-204ENST00000437644 875 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 AL627082.1-201ENST00000443847 235 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 SLC25A38P1-201ENST00000458247 943 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 NDUFB5-205ENST00000472629 744 ntTSL 3 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 TAGLN3-206ENST00000486460 920 ntTSL 5 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 LINC01099-201ENST00000507011 512 ntTSL 5 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 LINC01099-202ENST00000512527 578 ntTSL 2 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 POU5F1-205ENST00000512818 1233 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 AC098976.2-201ENST00000514144 881 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 C14orf2-208ENST00000554713 1058 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 MIR4517-201ENST00000578855 79 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 CDRT1-207ENST00000583965 562 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 AC011471.2-201ENST00000588192 523 ntTSL 4 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 PPP1R26P3-201ENST00000612861 3800 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 AC004466.2-201ENST00000614749 516 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 AL589826.2-201ENST00000635423 993 ntTSL 5 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 AC083841.4-201ENST00000637396 352 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 AL513478.3-201ENST00000641038 1095 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 PUM2-204ENST00000403432 3594 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 USP1-201ENST00000339950 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 PSMC1P1-201ENST00000478110 1320 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 TRIM64DP-201ENST00000529289 1342 ntBASIC12.53□□□□□ -0.4
LMO3Q8TAP4 CEPT1-201ENST00000357172 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 TXNL4B-201ENST00000268483 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 RFC4-202ENST00000392481 1448 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LMO3Q8TAP4 LRRC8B-202ENST00000358200 1957 ntTSL 5 BASIC12.52□□□□□ -0.4
LMO3Q8TAP4 PCAT1-202ENST00000561978 1992 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LMO3Q8TAP4 CBLB-203ENST00000403724 3350 ntTSL 2 BASIC12.52□□□□□ -0.4
LMO3Q8TAP4 NKIRAS1-205ENST00000421515 2018 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
LMO3Q8TAP4 MIR99AHG-220ENST00000635845 1588 ntTSL 5 BASIC12.52□□□□□ -0.4
LMO3Q8TAP4 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.52□□□□□ -0.4
LMO3Q8TAP4 BCL2L13-201ENST00000317582 2992 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LMO3Q8TAP4 KLHL10-201ENST00000293303 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms