Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
ARFGEF1Q9Y6D6 AC097658.1-201ENST00000475555 843 ntBASIC26.6■■□□□ 1.85
ARFGEF1Q9Y6D6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.6■■□□□ 1.85
ARFGEF1Q9Y6D6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ARFGEF1Q9Y6D6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.6■■□□□ 1.85
ARFGEF1Q9Y6D6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.6■■□□□ 1.85
ARFGEF1Q9Y6D6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ARFGEF1Q9Y6D6 DUSP8P5-201ENST00000422884 1815 ntBASIC26.6■■□□□ 1.85
ARFGEF1Q9Y6D6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.6■■□□□ 1.85
ARFGEF1Q9Y6D6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ARFGEF1Q9Y6D6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.59■■□□□ 1.85
ARFGEF1Q9Y6D6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ARFGEF1Q9Y6D6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ARFGEF1Q9Y6D6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.59■■□□□ 1.85
ARFGEF1Q9Y6D6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.59■■□□□ 1.85
ARFGEF1Q9Y6D6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
ARFGEF1Q9Y6D6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.59■■□□□ 1.85
ARFGEF1Q9Y6D6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ARFGEF1Q9Y6D6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ARFGEF1Q9Y6D6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ARFGEF1Q9Y6D6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
ARFGEF1Q9Y6D6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
ARFGEF1Q9Y6D6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ARFGEF1Q9Y6D6 AC026366.1-201ENST00000488803 879 ntBASIC26.58■■□□□ 1.85
ARFGEF1Q9Y6D6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ARFGEF1Q9Y6D6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ARFGEF1Q9Y6D6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
ARFGEF1Q9Y6D6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.58■■□□□ 1.85
ARFGEF1Q9Y6D6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ARFGEF1Q9Y6D6 AC142381.3-201ENST00000568208 1670 ntBASIC26.58■■□□□ 1.85
ARFGEF1Q9Y6D6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.84
ARFGEF1Q9Y6D6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.84
ARFGEF1Q9Y6D6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ARFGEF1Q9Y6D6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.57■■□□□ 1.84
ARFGEF1Q9Y6D6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
ARFGEF1Q9Y6D6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ARFGEF1Q9Y6D6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
ARFGEF1Q9Y6D6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.57■■□□□ 1.84
ARFGEF1Q9Y6D6 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.57■■□□□ 1.84
ARFGEF1Q9Y6D6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ARFGEF1Q9Y6D6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.57■■□□□ 1.84
ARFGEF1Q9Y6D6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.57■■□□□ 1.84
ARFGEF1Q9Y6D6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.56■■□□□ 1.84
ARFGEF1Q9Y6D6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
ARFGEF1Q9Y6D6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ARFGEF1Q9Y6D6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ARFGEF1Q9Y6D6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 EEF1DP3-203ENST00000566025 782 ntBASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 AC073912.3-201ENST00000624414 853 ntBASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 AC135731.1-201ENST00000569415 2548 ntBASIC26.55■■□□□ 1.84
ARFGEF1Q9Y6D6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
ARFGEF1Q9Y6D6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ARFGEF1Q9Y6D6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.54■■□□□ 1.84
ARFGEF1Q9Y6D6 AL359736.2-201ENST00000621992 437 ntBASIC26.54■■□□□ 1.84
ARFGEF1Q9Y6D6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ARFGEF1Q9Y6D6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
ARFGEF1Q9Y6D6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ARFGEF1Q9Y6D6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ARFGEF1Q9Y6D6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
ARFGEF1Q9Y6D6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.53■■□□□ 1.84
ARFGEF1Q9Y6D6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ARFGEF1Q9Y6D6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ARFGEF1Q9Y6D6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.53■■□□□ 1.84
ARFGEF1Q9Y6D6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ARFGEF1Q9Y6D6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.53■■□□□ 1.84
ARFGEF1Q9Y6D6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ARFGEF1Q9Y6D6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ARFGEF1Q9Y6D6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.52■■□□□ 1.84
ARFGEF1Q9Y6D6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.52■■□□□ 1.84
ARFGEF1Q9Y6D6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.52■■□□□ 1.84
ARFGEF1Q9Y6D6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.52■■□□□ 1.84
ARFGEF1Q9Y6D6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.52■■□□□ 1.84
ARFGEF1Q9Y6D6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.52■■□□□ 1.84
ARFGEF1Q9Y6D6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
ARFGEF1Q9Y6D6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 DUSP8P3-201ENST00000399571 1760 ntBASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 ECEL1P3-201ENST00000427961 737 ntBASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 AC073648.6-201ENST00000641589 218 ntBASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
ARFGEF1Q9Y6D6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ARFGEF1Q9Y6D6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms