Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CYP46A1Q9Y6A2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CYP46A1Q9Y6A2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CYP46A1Q9Y6A2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.47■■□□□ 1.67
CYP46A1Q9Y6A2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CYP46A1Q9Y6A2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CYP46A1Q9Y6A2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.47■■□□□ 1.67
CYP46A1Q9Y6A2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CYP46A1Q9Y6A2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 AC135279.3-201ENST00000610945 1311 ntBASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 AL137060.1-201ENST00000618151 2648 ntBASIC25.46■■□□□ 1.67
CYP46A1Q9Y6A2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
CYP46A1Q9Y6A2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
CYP46A1Q9Y6A2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CYP46A1Q9Y6A2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.45■■□□□ 1.66
CYP46A1Q9Y6A2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
CYP46A1Q9Y6A2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CYP46A1Q9Y6A2 AC233992.3-201ENST00000607491 485 ntBASIC25.45■■□□□ 1.66
CYP46A1Q9Y6A2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CYP46A1Q9Y6A2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CYP46A1Q9Y6A2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.45■■□□□ 1.66
CYP46A1Q9Y6A2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CYP46A1Q9Y6A2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.66
CYP46A1Q9Y6A2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CYP46A1Q9Y6A2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
CYP46A1Q9Y6A2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CYP46A1Q9Y6A2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CYP46A1Q9Y6A2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.43■■□□□ 1.66
CYP46A1Q9Y6A2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC25.43■■□□□ 1.66
CYP46A1Q9Y6A2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
CYP46A1Q9Y6A2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CYP46A1Q9Y6A2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.43■■□□□ 1.66
CYP46A1Q9Y6A2 AL034346.1-201ENST00000568244 1277 ntBASIC25.43■■□□□ 1.66
CYP46A1Q9Y6A2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.43■■□□□ 1.66
CYP46A1Q9Y6A2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CYP46A1Q9Y6A2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.43■■□□□ 1.66
CYP46A1Q9Y6A2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CYP46A1Q9Y6A2 AP004607.7-201ENST00000527152 1677 ntBASIC25.42■■□□□ 1.66
CYP46A1Q9Y6A2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CYP46A1Q9Y6A2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CYP46A1Q9Y6A2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CYP46A1Q9Y6A2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CYP46A1Q9Y6A2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
CYP46A1Q9Y6A2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
CYP46A1Q9Y6A2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CYP46A1Q9Y6A2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CYP46A1Q9Y6A2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CYP46A1Q9Y6A2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CYP46A1Q9Y6A2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.41■■□□□ 1.66
CYP46A1Q9Y6A2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.41■■□□□ 1.66
CYP46A1Q9Y6A2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CYP46A1Q9Y6A2 AC096631.2-201ENST00000436136 790 ntBASIC25.41■■□□□ 1.66
CYP46A1Q9Y6A2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.41■■□□□ 1.66
CYP46A1Q9Y6A2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CYP46A1Q9Y6A2 AC133561.4-201ENST00000566112 224 ntBASIC25.41■■□□□ 1.66
CYP46A1Q9Y6A2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.4■■□□□ 1.66
CYP46A1Q9Y6A2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms