Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCN10AQ9Y5Y9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCN10AQ9Y5Y9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCN10AQ9Y5Y9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SCN10AQ9Y5Y9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCN10AQ9Y5Y9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.8■■□□□ 1.4
SCN10AQ9Y5Y9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.8■■□□□ 1.4
SCN10AQ9Y5Y9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCN10AQ9Y5Y9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.8■■□□□ 1.4
SCN10AQ9Y5Y9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCN10AQ9Y5Y9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCN10AQ9Y5Y9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCN10AQ9Y5Y9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCN10AQ9Y5Y9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCN10AQ9Y5Y9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.8■■□□□ 1.4
SCN10AQ9Y5Y9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
SCN10AQ9Y5Y9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCN10AQ9Y5Y9 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.79■■□□□ 1.4
SCN10AQ9Y5Y9 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.79■■□□□ 1.4
SCN10AQ9Y5Y9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCN10AQ9Y5Y9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCN10AQ9Y5Y9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCN10AQ9Y5Y9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.78■■□□□ 1.4
SCN10AQ9Y5Y9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.78■■□□□ 1.4
SCN10AQ9Y5Y9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCN10AQ9Y5Y9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCN10AQ9Y5Y9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCN10AQ9Y5Y9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.78■■□□□ 1.4
SCN10AQ9Y5Y9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.78■■□□□ 1.4
SCN10AQ9Y5Y9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.78■■□□□ 1.4
SCN10AQ9Y5Y9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.78■■□□□ 1.4
SCN10AQ9Y5Y9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.78■■□□□ 1.4
SCN10AQ9Y5Y9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SCN10AQ9Y5Y9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.77■■□□□ 1.4
SCN10AQ9Y5Y9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SCN10AQ9Y5Y9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.77■■□□□ 1.4
SCN10AQ9Y5Y9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCN10AQ9Y5Y9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SCN10AQ9Y5Y9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SCN10AQ9Y5Y9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCN10AQ9Y5Y9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.77■■□□□ 1.4
SCN10AQ9Y5Y9 AC105036.2-201ENST00000569468 176 ntBASIC23.77■■□□□ 1.4
SCN10AQ9Y5Y9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.39
SCN10AQ9Y5Y9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 SLC7A5P1-201ENST00000568957 537 ntBASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCN10AQ9Y5Y9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCN10AQ9Y5Y9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCN10AQ9Y5Y9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.75■■□□□ 1.39
SCN10AQ9Y5Y9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCN10AQ9Y5Y9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCN10AQ9Y5Y9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SCN10AQ9Y5Y9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.75■■□□□ 1.39
SCN10AQ9Y5Y9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SCN10AQ9Y5Y9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.75■■□□□ 1.39
SCN10AQ9Y5Y9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.74■■□□□ 1.39
SCN10AQ9Y5Y9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.74■■□□□ 1.39
SCN10AQ9Y5Y9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.74■■□□□ 1.39
SCN10AQ9Y5Y9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.74■■□□□ 1.39
SCN10AQ9Y5Y9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCN10AQ9Y5Y9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
SCN10AQ9Y5Y9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCN10AQ9Y5Y9 AC133041.1-202ENST00000642053 222 ntBASIC23.74■■□□□ 1.39
SCN10AQ9Y5Y9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCN10AQ9Y5Y9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCN10AQ9Y5Y9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.74■■□□□ 1.39
SCN10AQ9Y5Y9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 MKRN4P-201ENST00000444706 1521 ntBASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.73■■□□□ 1.39
SCN10AQ9Y5Y9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCN10AQ9Y5Y9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SCN10AQ9Y5Y9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.72■■□□□ 1.39
SCN10AQ9Y5Y9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SCN10AQ9Y5Y9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms