Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CDC42BPBQ9Y5S2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CDC42BPBQ9Y5S2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CDC42BPBQ9Y5S2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC32.89■■■□□ 2.86
CDC42BPBQ9Y5S2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC32.89■■■□□ 2.86
CDC42BPBQ9Y5S2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC32.89■■■□□ 2.86
CDC42BPBQ9Y5S2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.86
CDC42BPBQ9Y5S2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.85
CDC42BPBQ9Y5S2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC32.88■■■□□ 2.85
CDC42BPBQ9Y5S2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC32.88■■■□□ 2.85
CDC42BPBQ9Y5S2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC32.88■■■□□ 2.85
CDC42BPBQ9Y5S2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC32.88■■■□□ 2.85
CDC42BPBQ9Y5S2 AC016405.3-201ENST00000607710 860 ntBASIC32.88■■■□□ 2.85
CDC42BPBQ9Y5S2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC32.88■■■□□ 2.85
CDC42BPBQ9Y5S2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC32.88■■■□□ 2.85
CDC42BPBQ9Y5S2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CDC42BPBQ9Y5S2 FAM201B-201ENST00000458407 597 ntBASIC32.88■■■□□ 2.85
CDC42BPBQ9Y5S2 RPS2P52-201ENST00000469610 820 ntBASIC32.88■■■□□ 2.85
CDC42BPBQ9Y5S2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC32.88■■■□□ 2.85
CDC42BPBQ9Y5S2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC32.88■■■□□ 2.85
CDC42BPBQ9Y5S2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
CDC42BPBQ9Y5S2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC32.87■■■□□ 2.85
CDC42BPBQ9Y5S2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC32.87■■■□□ 2.85
CDC42BPBQ9Y5S2 AC093787.1-201ENST00000450396 207 ntBASIC32.87■■■□□ 2.85
CDC42BPBQ9Y5S2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC32.87■■■□□ 2.85
CDC42BPBQ9Y5S2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CDC42BPBQ9Y5S2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CDC42BPBQ9Y5S2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC32.86■■■□□ 2.85
CDC42BPBQ9Y5S2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CDC42BPBQ9Y5S2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC32.86■■■□□ 2.85
CDC42BPBQ9Y5S2 MYC-209ENST00000641252 345 ntBASIC32.86■■■□□ 2.85
CDC42BPBQ9Y5S2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CDC42BPBQ9Y5S2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CDC42BPBQ9Y5S2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDC42BPBQ9Y5S2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC32.85■■■□□ 2.85
CDC42BPBQ9Y5S2 RARRES2P4-201ENST00000514074 484 ntBASIC32.85■■■□□ 2.85
CDC42BPBQ9Y5S2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CDC42BPBQ9Y5S2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC32.85■■■□□ 2.85
CDC42BPBQ9Y5S2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDC42BPBQ9Y5S2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC32.85■■■□□ 2.85
CDC42BPBQ9Y5S2 MIPEPP3-201ENST00000412105 444 ntBASIC32.85■■■□□ 2.85
CDC42BPBQ9Y5S2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDC42BPBQ9Y5S2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CDC42BPBQ9Y5S2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC32.84■■■□□ 2.85
CDC42BPBQ9Y5S2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
CDC42BPBQ9Y5S2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
CDC42BPBQ9Y5S2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC32.84■■■□□ 2.85
CDC42BPBQ9Y5S2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CDC42BPBQ9Y5S2 PRORSD1P-201ENST00000295112 541 ntBASIC32.83■■■□□ 2.85
CDC42BPBQ9Y5S2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
CDC42BPBQ9Y5S2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
CDC42BPBQ9Y5S2 TERF1P5-201ENST00000477545 1207 ntBASIC32.83■■■□□ 2.85
CDC42BPBQ9Y5S2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC32.83■■■□□ 2.85
CDC42BPBQ9Y5S2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC32.83■■■□□ 2.85
CDC42BPBQ9Y5S2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CDC42BPBQ9Y5S2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CDC42BPBQ9Y5S2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
CDC42BPBQ9Y5S2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
CDC42BPBQ9Y5S2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC32.82■■■□□ 2.85
CDC42BPBQ9Y5S2 AC092118.2-201ENST00000613495 667 ntBASIC32.82■■■□□ 2.85
CDC42BPBQ9Y5S2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC32.82■■■□□ 2.84
CDC42BPBQ9Y5S2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CDC42BPBQ9Y5S2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC32.82■■■□□ 2.84
CDC42BPBQ9Y5S2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC32.82■■■□□ 2.84
CDC42BPBQ9Y5S2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC32.82■■■□□ 2.84
CDC42BPBQ9Y5S2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC32.82■■■□□ 2.84
CDC42BPBQ9Y5S2 OR10C1-204ENST00000622521 1039 ntBASIC32.82■■■□□ 2.84
CDC42BPBQ9Y5S2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CDC42BPBQ9Y5S2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDC42BPBQ9Y5S2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDC42BPBQ9Y5S2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC32.81■■■□□ 2.84
CDC42BPBQ9Y5S2 MIR4758-201ENST00000577688 71 ntBASIC32.81■■■□□ 2.84
CDC42BPBQ9Y5S2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDC42BPBQ9Y5S2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CDC42BPBQ9Y5S2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDC42BPBQ9Y5S2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDC42BPBQ9Y5S2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDC42BPBQ9Y5S2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
CDC42BPBQ9Y5S2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC32.8■■■□□ 2.84
CDC42BPBQ9Y5S2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CDC42BPBQ9Y5S2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CDC42BPBQ9Y5S2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CDC42BPBQ9Y5S2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
CDC42BPBQ9Y5S2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC32.8■■■□□ 2.84
CDC42BPBQ9Y5S2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC32.8■■■□□ 2.84
CDC42BPBQ9Y5S2 OR7E47P-201ENST00000546390 1422 ntBASIC32.8■■■□□ 2.84
CDC42BPBQ9Y5S2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC32.8■■■□□ 2.84
CDC42BPBQ9Y5S2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CDC42BPBQ9Y5S2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC32.8■■■□□ 2.84
CDC42BPBQ9Y5S2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
CDC42BPBQ9Y5S2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
CDC42BPBQ9Y5S2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC32.79■■■□□ 2.84
CDC42BPBQ9Y5S2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC32.79■■■□□ 2.84
CDC42BPBQ9Y5S2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC32.79■■■□□ 2.84
CDC42BPBQ9Y5S2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC32.79■■■□□ 2.84
CDC42BPBQ9Y5S2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
CDC42BPBQ9Y5S2 AC053503.5-201ENST00000601508 636 ntBASIC32.78■■■□□ 2.84
CDC42BPBQ9Y5S2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC32.78■■■□□ 2.84
CDC42BPBQ9Y5S2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CDC42BPBQ9Y5S2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC32.78■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms