Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF6Q9Y4K3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAF6Q9Y4K3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF6Q9Y4K3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TRAF6Q9Y4K3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAF6Q9Y4K3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TRAF6Q9Y4K3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF6Q9Y4K3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF6Q9Y4K3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF6Q9Y4K3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAF6Q9Y4K3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 MIR3181-201ENST00000578512 73 ntBASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 AC104564.3-201ENST00000582367 638 ntBASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF6Q9Y4K3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAF6Q9Y4K3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAF6Q9Y4K3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAF6Q9Y4K3 AL356740.2-201ENST00000601559 647 ntBASIC20.85■□□□□ 0.93
TRAF6Q9Y4K3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAF6Q9Y4K3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAF6Q9Y4K3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAF6Q9Y4K3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF6Q9Y4K3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF6Q9Y4K3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF6Q9Y4K3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAF6Q9Y4K3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF6Q9Y4K3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAF6Q9Y4K3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF6Q9Y4K3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF6Q9Y4K3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRAF6Q9Y4K3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAF6Q9Y4K3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF6Q9Y4K3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF6Q9Y4K3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF6Q9Y4K3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF6Q9Y4K3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF6Q9Y4K3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF6Q9Y4K3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAF6Q9Y4K3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAF6Q9Y4K3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF6Q9Y4K3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAF6Q9Y4K3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
TRAF6Q9Y4K3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.83■□□□□ 0.92
TRAF6Q9Y4K3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.83■□□□□ 0.92
TRAF6Q9Y4K3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TRAF6Q9Y4K3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.83■□□□□ 0.92
TRAF6Q9Y4K3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAF6Q9Y4K3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 OR2I1P-207ENST00000453522 948 ntBASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAF6Q9Y4K3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms