Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 AC092028.1-203ENST00000608262 953 ntBASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 AC079089.2-201ENST00000531211 1277 ntBASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 AC026471.6-201ENST00000622954 1905 ntBASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBE2D4Q9Y2X8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 AL157384.1-201ENST00000445995 2473 ntBASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 LINC01521-201ENST00000504184 1943 ntBASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 MTDHP2-201ENST00000601468 714 ntBASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 AL031602.1-201ENST00000633169 911 ntBASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBE2D4Q9Y2X8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 CD72-202ENST00000378430 585 ntTSL 3 BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
UBE2D4Q9Y2X8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 OR7E47P-201ENST00000546390 1422 ntBASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
UBE2D4Q9Y2X8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBE2D4Q9Y2X8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms