Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.51■□□□□ 0.39
RCL1Q9Y2P8 AC004687.1-201ENST00000579003 1625 ntBASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 AL391422.3-201ENST00000603791 2761 ntBASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 U85056.1-201ENST00000616429 682 ntBASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCL1Q9Y2P8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 DUX4L4-201ENST00000566884 1269 ntBASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RCL1Q9Y2P8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RCL1Q9Y2P8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 KRT18P60-201ENST00000312876 1297 ntBASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCL1Q9Y2P8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RCL1Q9Y2P8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.46■□□□□ 0.39
RCL1Q9Y2P8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.46■□□□□ 0.39
RCL1Q9Y2P8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
RCL1Q9Y2P8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.46■□□□□ 0.39
RCL1Q9Y2P8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.46■□□□□ 0.39
RCL1Q9Y2P8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RCL1Q9Y2P8 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.46■□□□□ 0.39
RCL1Q9Y2P8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RCL1Q9Y2P8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.46■□□□□ 0.39
RCL1Q9Y2P8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms