Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX6Q9UPM6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LHX6Q9UPM6 FP325331.1-202ENST00000623531 1380 ntBASIC20.3■□□□□ 0.84
LHX6Q9UPM6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LHX6Q9UPM6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LHX6Q9UPM6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LHX6Q9UPM6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LHX6Q9UPM6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LHX6Q9UPM6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LHX6Q9UPM6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.29■□□□□ 0.84
LHX6Q9UPM6 AC022211.4-201ENST00000625094 2161 ntBASIC20.29■□□□□ 0.84
LHX6Q9UPM6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LHX6Q9UPM6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LHX6Q9UPM6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 AC073648.6-201ENST00000641589 218 ntBASIC20.28■□□□□ 0.84
LHX6Q9UPM6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 AC133561.1-201ENST00000568600 2415 ntBASIC20.28■□□□□ 0.84
LHX6Q9UPM6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.28■□□□□ 0.84
LHX6Q9UPM6 AP003733.4-201ENST00000623785 1697 ntBASIC20.28■□□□□ 0.84
LHX6Q9UPM6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX6Q9UPM6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX6Q9UPM6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX6Q9UPM6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX6Q9UPM6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.27■□□□□ 0.84
LHX6Q9UPM6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
LHX6Q9UPM6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.27■□□□□ 0.83
LHX6Q9UPM6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LHX6Q9UPM6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 KRT87P-202ENST00000534226 1464 ntBASIC20.26■□□□□ 0.83
LHX6Q9UPM6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 AC097658.1-201ENST00000475555 843 ntBASIC20.26■□□□□ 0.83
LHX6Q9UPM6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX6Q9UPM6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
LHX6Q9UPM6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 AC010536.3-201ENST00000620306 533 ntBASIC20.24■□□□□ 0.83
LHX6Q9UPM6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX6Q9UPM6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
LHX6Q9UPM6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LHX6Q9UPM6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LHX6Q9UPM6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LHX6Q9UPM6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LHX6Q9UPM6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LHX6Q9UPM6 AC026366.1-201ENST00000488803 879 ntBASIC20.23■□□□□ 0.83
LHX6Q9UPM6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms