Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTI1BQ9UEU0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.06■□□□□ 0.96
VTI1BQ9UEU0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 SRD5A1P1-201ENST00000442297 786 ntBASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.05■□□□□ 0.96
VTI1BQ9UEU0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
VTI1BQ9UEU0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1BQ9UEU0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.04■□□□□ 0.96
VTI1BQ9UEU0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1BQ9UEU0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1BQ9UEU0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1BQ9UEU0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1BQ9UEU0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.04■□□□□ 0.96
VTI1BQ9UEU0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.04■□□□□ 0.96
VTI1BQ9UEU0 FEM1AP4-201ENST00000443167 1987 ntBASIC21.04■□□□□ 0.96
VTI1BQ9UEU0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1BQ9UEU0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1BQ9UEU0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 AL499627.2-201ENST00000606283 725 ntBASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
VTI1BQ9UEU0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1BQ9UEU0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1BQ9UEU0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1BQ9UEU0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1BQ9UEU0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1BQ9UEU0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1BQ9UEU0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1BQ9UEU0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1BQ9UEU0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTI1BQ9UEU0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
VTI1BQ9UEU0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.02■□□□□ 0.95
VTI1BQ9UEU0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.02■□□□□ 0.95
VTI1BQ9UEU0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
VTI1BQ9UEU0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 SLC25A24-204ENST00000569674 2357 ntBASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTI1BQ9UEU0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21■□□□□ 0.95
VTI1BQ9UEU0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTI1BQ9UEU0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTI1BQ9UEU0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21■□□□□ 0.95
VTI1BQ9UEU0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTI1BQ9UEU0 AC241377.3-202ENST00000626088 1088 ntBASIC21■□□□□ 0.95
VTI1BQ9UEU0 AC241585.3-202ENST00000628937 1088 ntBASIC21■□□□□ 0.95
VTI1BQ9UEU0 AC245100.8-202ENST00000629247 1058 ntBASIC21■□□□□ 0.95
VTI1BQ9UEU0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21■□□□□ 0.95
VTI1BQ9UEU0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTI1BQ9UEU0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21■□□□□ 0.95
VTI1BQ9UEU0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTI1BQ9UEU0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTI1BQ9UEU0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTI1BQ9UEU0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTI1BQ9UEU0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
VTI1BQ9UEU0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
VTI1BQ9UEU0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.99■□□□□ 0.95
VTI1BQ9UEU0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTI1BQ9UEU0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTI1BQ9UEU0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTI1BQ9UEU0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 792.2 ms