Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 RARRES2P11-201ENST00000635158 484 ntBASIC20.23■□□□□ 0.83
CTSFQ9UBX1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 KRT87P-202ENST00000534226 1464 ntBASIC20.23■□□□□ 0.83
CTSFQ9UBX1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 KRT19P1-201ENST00000405746 1186 ntBASIC20.22■□□□□ 0.83
CTSFQ9UBX1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.22■□□□□ 0.83
CTSFQ9UBX1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CTSFQ9UBX1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSFQ9UBX1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSFQ9UBX1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSFQ9UBX1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.21■□□□□ 0.83
CTSFQ9UBX1 AC016769.1-201ENST00000409132 1010 ntBASIC20.21■□□□□ 0.83
CTSFQ9UBX1 AC006015.1-201ENST00000429970 570 ntBASIC20.21■□□□□ 0.83
CTSFQ9UBX1 AC090192.1-201ENST00000517740 490 ntBASIC20.21■□□□□ 0.83
CTSFQ9UBX1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSFQ9UBX1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.21■□□□□ 0.83
CTSFQ9UBX1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTSFQ9UBX1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CTSFQ9UBX1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.21■□□□□ 0.83
CTSFQ9UBX1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSFQ9UBX1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSFQ9UBX1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 AL034346.1-201ENST00000568244 1277 ntBASIC20.2■□□□□ 0.82
CTSFQ9UBX1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CTSFQ9UBX1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 AC104187.1-201ENST00000607510 612 ntBASIC20.19■□□□□ 0.82
CTSFQ9UBX1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSFQ9UBX1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTSFQ9UBX1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSFQ9UBX1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms