Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.23■■□□□ 1.31
CALCOCO1Q9P1Z2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.23■■□□□ 1.31
CALCOCO1Q9P1Z2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CALCOCO1Q9P1Z2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CALCOCO1Q9P1Z2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CALCOCO1Q9P1Z2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.22■■□□□ 1.31
CALCOCO1Q9P1Z2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CALCOCO1Q9P1Z2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CALCOCO1Q9P1Z2 RARRES2P6-201ENST00000567333 442 ntBASIC23.22■■□□□ 1.31
CALCOCO1Q9P1Z2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.22■■□□□ 1.31
CALCOCO1Q9P1Z2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CALCOCO1Q9P1Z2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.22■■□□□ 1.31
CALCOCO1Q9P1Z2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CALCOCO1Q9P1Z2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.22■■□□□ 1.31
CALCOCO1Q9P1Z2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
CALCOCO1Q9P1Z2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CALCOCO1Q9P1Z2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.22■■□□□ 1.31
CALCOCO1Q9P1Z2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CALCOCO1Q9P1Z2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.21■■□□□ 1.31
CALCOCO1Q9P1Z2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.21■■□□□ 1.31
CALCOCO1Q9P1Z2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.21■■□□□ 1.31
CALCOCO1Q9P1Z2 AL355001.2-201ENST00000620617 1191 ntBASIC23.21■■□□□ 1.31
CALCOCO1Q9P1Z2 AC009086.3-201ENST00000623486 1008 ntBASIC23.21■■□□□ 1.31
CALCOCO1Q9P1Z2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.21■■□□□ 1.31
CALCOCO1Q9P1Z2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.21■■□□□ 1.31
CALCOCO1Q9P1Z2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CALCOCO1Q9P1Z2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.21■■□□□ 1.31
CALCOCO1Q9P1Z2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 AC241377.3-202ENST00000626088 1088 ntBASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 AC241585.3-202ENST00000628937 1088 ntBASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 AC245100.8-202ENST00000629247 1058 ntBASIC23.2■■□□□ 1.3
CALCOCO1Q9P1Z2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.19■■□□□ 1.3
CALCOCO1Q9P1Z2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CALCOCO1Q9P1Z2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
CALCOCO1Q9P1Z2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CALCOCO1Q9P1Z2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CALCOCO1Q9P1Z2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CALCOCO1Q9P1Z2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CALCOCO1Q9P1Z2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CALCOCO1Q9P1Z2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CALCOCO1Q9P1Z2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.19■■□□□ 1.3
CALCOCO1Q9P1Z2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.19■■□□□ 1.3
CALCOCO1Q9P1Z2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 SERBP1P1-201ENST00000396021 1160 ntBASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.18■■□□□ 1.3
CALCOCO1Q9P1Z2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 AC242852.2-201ENST00000615738 1807 ntBASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 MIR3181-201ENST00000578512 73 ntBASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CALCOCO1Q9P1Z2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 DUX4L19-201ENST00000557448 1267 ntBASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 AL499627.2-201ENST00000606283 725 ntBASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 pRNA.6-201ENST00000610482 90 ntBASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 pRNA.5-201ENST00000612139 90 ntBASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 pRNA.11-201ENST00000618423 90 ntBASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 pRNA.13-201ENST00000619112 90 ntBASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CALCOCO1Q9P1Z2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms