Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 AC004408.2-201ENST00000623613 2777 ntBASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 AFG3L1P-217ENST00000557444 2447 ntBASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CDC42SE1Q9NRR8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 AIRN-201ENST00000601203 4374 ntBASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 HR-201ENST00000312841 5351 ntTSL 5 BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CDC42SE1Q9NRR8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
CDC42SE1Q9NRR8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 AL139384.1-201ENST00000612143 3047 ntBASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CDC42SE1Q9NRR8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms