Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AL451085.2-201ENST00000605085 799 ntBASIC14.77□□□□□ -0.05
CDC42SE2Q9NRR3 AC068587.7-201ENST00000641602 218 ntBASIC14.77□□□□□ -0.05
CDC42SE2Q9NRR3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42SE2Q9NRR3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CDC42SE2Q9NRR3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.77□□□□□ -0.05
CDC42SE2Q9NRR3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42SE2Q9NRR3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CDC42SE2Q9NRR3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.77□□□□□ -0.05
CDC42SE2Q9NRR3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42SE2Q9NRR3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CDC42SE2Q9NRR3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42SE2Q9NRR3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 AF106564.1-201ENST00000607058 2553 ntBASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 AC026471.6-201ENST00000622954 1905 ntBASIC14.76□□□□□ -0.05
CDC42SE2Q9NRR3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 pRNA.6-201ENST00000610482 90 ntBASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 pRNA.5-201ENST00000612139 90 ntBASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 pRNA.11-201ENST00000618423 90 ntBASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 pRNA.13-201ENST00000619112 90 ntBASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC42SE2Q9NRR3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42SE2Q9NRR3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42SE2Q9NRR3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 AC009299.2-201ENST00000482477 511 ntBASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms