Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
KCNMB3Q9NPA1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
KCNMB3Q9NPA1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
KCNMB3Q9NPA1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.24■■□□□ 1.47
KCNMB3Q9NPA1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
KCNMB3Q9NPA1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.24■■□□□ 1.47
KCNMB3Q9NPA1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
KCNMB3Q9NPA1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.24■■□□□ 1.47
KCNMB3Q9NPA1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.24■■□□□ 1.47
KCNMB3Q9NPA1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
KCNMB3Q9NPA1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 DUX4L2-201ENST00000561772 1275 ntBASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 DUX4L6-201ENST00000626483 1275 ntBASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 DUX4L1-201ENST00000627662 1275 ntBASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 DUX4L8-201ENST00000629013 1275 ntBASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 DUX4L3-201ENST00000630187 1275 ntBASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 DUX4L7-201ENST00000630678 1275 ntBASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 DUX4L5-201ENST00000630834 1275 ntBASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 EP400NL-214ENST00000641289 2402 ntBASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
KCNMB3Q9NPA1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNMB3Q9NPA1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
KCNMB3Q9NPA1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNMB3Q9NPA1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.21■■□□□ 1.47
KCNMB3Q9NPA1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNMB3Q9NPA1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNMB3Q9NPA1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.21■■□□□ 1.47
KCNMB3Q9NPA1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.21■■□□□ 1.47
KCNMB3Q9NPA1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNMB3Q9NPA1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNMB3Q9NPA1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNMB3Q9NPA1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNMB3Q9NPA1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 FAM99A-202ENST00000538190 1989 ntBASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 KRT18P14-201ENST00000534205 1250 ntBASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 AC026471.6-201ENST00000622954 1905 ntBASIC24.2■■□□□ 1.46
KCNMB3Q9NPA1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KCNMB3Q9NPA1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
KCNMB3Q9NPA1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
KCNMB3Q9NPA1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KCNMB3Q9NPA1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNMB3Q9NPA1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNMB3Q9NPA1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
KCNMB3Q9NPA1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNMB3Q9NPA1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNMB3Q9NPA1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.18■■□□□ 1.46
KCNMB3Q9NPA1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNMB3Q9NPA1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.18■■□□□ 1.46
KCNMB3Q9NPA1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
KCNMB3Q9NPA1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
KCNMB3Q9NPA1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.18■■□□□ 1.46
KCNMB3Q9NPA1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
KCNMB3Q9NPA1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.17■■□□□ 1.46
KCNMB3Q9NPA1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.17■■□□□ 1.46
KCNMB3Q9NPA1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
KCNMB3Q9NPA1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
KCNMB3Q9NPA1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.17■■□□□ 1.46
KCNMB3Q9NPA1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.17■■□□□ 1.46
KCNMB3Q9NPA1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
KCNMB3Q9NPA1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
KCNMB3Q9NPA1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.17■■□□□ 1.46
KCNMB3Q9NPA1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNMB3Q9NPA1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
KCNMB3Q9NPA1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNMB3Q9NPA1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNMB3Q9NPA1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms