Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 AC142381.2-201ENST00000566120 298 ntBASIC20.81■□□□□ 0.92
CLK4Q9HAZ1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CLK4Q9HAZ1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.81■□□□□ 0.92
CLK4Q9HAZ1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLK4Q9HAZ1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.81■□□□□ 0.92
CLK4Q9HAZ1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.81■□□□□ 0.92
CLK4Q9HAZ1 AC092053.2-201ENST00000640557 1818 ntBASIC20.81■□□□□ 0.92
CLK4Q9HAZ1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 SLC47A1P1-202ENST00000449666 945 ntBASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 AL031602.1-201ENST00000633169 911 ntBASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.8■□□□□ 0.92
CLK4Q9HAZ1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CLK4Q9HAZ1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLK4Q9HAZ1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLK4Q9HAZ1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLK4Q9HAZ1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLK4Q9HAZ1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLK4Q9HAZ1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.79■□□□□ 0.92
CLK4Q9HAZ1 AF213884.3-201ENST00000563833 479 ntBASIC20.79■□□□□ 0.92
CLK4Q9HAZ1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLK4Q9HAZ1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CLK4Q9HAZ1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLK4Q9HAZ1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.78■□□□□ 0.92
CLK4Q9HAZ1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLK4Q9HAZ1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.78■□□□□ 0.92
CLK4Q9HAZ1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CLK4Q9HAZ1 AC008764.7-201ENST00000593779 1081 ntBASIC20.78■□□□□ 0.92
CLK4Q9HAZ1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLK4Q9HAZ1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLK4Q9HAZ1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLK4Q9HAZ1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLK4Q9HAZ1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CLK4Q9HAZ1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLK4Q9HAZ1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 AC099791.1-201ENST00000416440 715 ntBASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 AC087239.1-201ENST00000622671 572 ntBASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CLK4Q9HAZ1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CLK4Q9HAZ1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CLK4Q9HAZ1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLK4Q9HAZ1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLK4Q9HAZ1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.75■□□□□ 0.91
CLK4Q9HAZ1 CA15P2-201ENST00000611168 834 ntBASIC20.75■□□□□ 0.91
CLK4Q9HAZ1 AC026310.3-201ENST00000625186 2373 ntBASIC20.75■□□□□ 0.91
CLK4Q9HAZ1 AC139530.1-201ENST00000575312 1977 ntBASIC20.75■□□□□ 0.91
CLK4Q9HAZ1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.75■□□□□ 0.91
CLK4Q9HAZ1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CLK4Q9HAZ1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 AC126544.1-201ENST00000580842 1059 ntBASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 AC010525.1-201ENST00000585559 441 ntBASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CLK4Q9HAZ1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms