Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.55■□□□□ 0.88
BRF2Q9HAW0 AP004607.7-201ENST00000527152 1677 ntBASIC20.55■□□□□ 0.88
BRF2Q9HAW0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRF2Q9HAW0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRF2Q9HAW0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRF2Q9HAW0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRF2Q9HAW0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.55■□□□□ 0.88
BRF2Q9HAW0 AC104564.3-201ENST00000582367 638 ntBASIC20.55■□□□□ 0.88
BRF2Q9HAW0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRF2Q9HAW0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRF2Q9HAW0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRF2Q9HAW0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
BRF2Q9HAW0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRF2Q9HAW0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRF2Q9HAW0 AC026471.6-201ENST00000622954 1905 ntBASIC20.55■□□□□ 0.88
BRF2Q9HAW0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRF2Q9HAW0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 AC096631.2-201ENST00000436136 790 ntBASIC20.53■□□□□ 0.88
BRF2Q9HAW0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 AC126544.1-201ENST00000580842 1059 ntBASIC20.53■□□□□ 0.88
BRF2Q9HAW0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 AC106739.1-201ENST00000617035 715 ntBASIC20.53■□□□□ 0.88
BRF2Q9HAW0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
BRF2Q9HAW0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 IGHV3-19-201ENST00000521488 291 ntBASIC20.52■□□□□ 0.88
BRF2Q9HAW0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRF2Q9HAW0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
BRF2Q9HAW0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 AC026310.3-201ENST00000625186 2373 ntBASIC20.51■□□□□ 0.87
BRF2Q9HAW0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
BRF2Q9HAW0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 PBX2P1-201ENST00000493219 1291 ntBASIC20.5■□□□□ 0.87
BRF2Q9HAW0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 AC027682.1-201ENST00000562846 899 ntBASIC20.5■□□□□ 0.87
BRF2Q9HAW0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 SMUG1P1-201ENST00000590640 811 ntBASIC20.5■□□□□ 0.87
BRF2Q9HAW0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.5■□□□□ 0.87
BRF2Q9HAW0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms