Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC073130.3-201ENST00000624389 2278 ntBASIC26.27■■□□□ 1.8
UPF2Q9HAU5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UPF2Q9HAU5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UPF2Q9HAU5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.26■■□□□ 1.79
UPF2Q9HAU5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
UPF2Q9HAU5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.26■■□□□ 1.79
UPF2Q9HAU5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.26■■□□□ 1.79
UPF2Q9HAU5 AC012354.3-201ENST00000623734 483 ntBASIC26.26■■□□□ 1.79
UPF2Q9HAU5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
UPF2Q9HAU5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC26.25■■□□□ 1.79
UPF2Q9HAU5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.24■■□□□ 1.79
UPF2Q9HAU5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
UPF2Q9HAU5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
UPF2Q9HAU5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UPF2Q9HAU5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.22■■□□□ 1.79
UPF2Q9HAU5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UPF2Q9HAU5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UPF2Q9HAU5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.22■■□□□ 1.79
UPF2Q9HAU5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
UPF2Q9HAU5 AC104564.3-201ENST00000582367 638 ntBASIC26.22■■□□□ 1.79
UPF2Q9HAU5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
UPF2Q9HAU5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UPF2Q9HAU5 C17orf82-201ENST00000623772 1530 ntBASIC26.22■■□□□ 1.79
UPF2Q9HAU5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UPF2Q9HAU5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
UPF2Q9HAU5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
UPF2Q9HAU5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.22■■□□□ 1.79
UPF2Q9HAU5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
UPF2Q9HAU5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
UPF2Q9HAU5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.21■■□□□ 1.79
UPF2Q9HAU5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
UPF2Q9HAU5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
UPF2Q9HAU5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
UPF2Q9HAU5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
UPF2Q9HAU5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
UPF2Q9HAU5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
UPF2Q9HAU5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
UPF2Q9HAU5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
UPF2Q9HAU5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
UPF2Q9HAU5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.2■■□□□ 1.78
UPF2Q9HAU5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
UPF2Q9HAU5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
UPF2Q9HAU5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
UPF2Q9HAU5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.2■■□□□ 1.78
UPF2Q9HAU5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 AL033527.3-201ENST00000566366 1196 ntBASIC26.19■■□□□ 1.78
UPF2Q9HAU5 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 AL499627.2-201ENST00000606283 725 ntBASIC26.19■■□□□ 1.78
UPF2Q9HAU5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
UPF2Q9HAU5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms