Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.97■■□□□ 1.27
VRTNQ9H8Y1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VRTNQ9H8Y1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VRTNQ9H8Y1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VRTNQ9H8Y1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 KRT18P14-201ENST00000534205 1250 ntBASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 DUX4L2-201ENST00000561772 1275 ntBASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 DUX4L6-201ENST00000626483 1275 ntBASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 DUX4L1-201ENST00000627662 1275 ntBASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 DUX4L8-201ENST00000629013 1275 ntBASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 DUX4L3-201ENST00000630187 1275 ntBASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 DUX4L7-201ENST00000630678 1275 ntBASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 DUX4L5-201ENST00000630834 1275 ntBASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
VRTNQ9H8Y1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
VRTNQ9H8Y1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
VRTNQ9H8Y1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
VRTNQ9H8Y1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
VRTNQ9H8Y1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.95■■□□□ 1.26
VRTNQ9H8Y1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VRTNQ9H8Y1 FAM99A-202ENST00000538190 1989 ntBASIC22.94■■□□□ 1.26
VRTNQ9H8Y1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.94■■□□□ 1.26
VRTNQ9H8Y1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.94■■□□□ 1.26
VRTNQ9H8Y1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VRTNQ9H8Y1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VRTNQ9H8Y1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
VRTNQ9H8Y1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
VRTNQ9H8Y1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.94■■□□□ 1.26
VRTNQ9H8Y1 AC034268.1-201ENST00000441047 882 ntBASIC22.94■■□□□ 1.26
VRTNQ9H8Y1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.94■■□□□ 1.26
VRTNQ9H8Y1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VRTNQ9H8Y1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
VRTNQ9H8Y1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
VRTNQ9H8Y1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.93■■□□□ 1.26
VRTNQ9H8Y1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
VRTNQ9H8Y1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
VRTNQ9H8Y1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.93■■□□□ 1.26
VRTNQ9H8Y1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
VRTNQ9H8Y1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
VRTNQ9H8Y1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
VRTNQ9H8Y1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
VRTNQ9H8Y1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
VRTNQ9H8Y1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
VRTNQ9H8Y1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VRTNQ9H8Y1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VRTNQ9H8Y1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
VRTNQ9H8Y1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
VRTNQ9H8Y1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VRTNQ9H8Y1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VRTNQ9H8Y1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 MIR5787-201ENST00000611784 55 ntBASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
VRTNQ9H8Y1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
VRTNQ9H8Y1 C11orf96-202ENST00000528572 1834 ntBASIC22.9■■□□□ 1.26
VRTNQ9H8Y1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VRTNQ9H8Y1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VRTNQ9H8Y1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.9■■□□□ 1.26
VRTNQ9H8Y1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.9■■□□□ 1.26
VRTNQ9H8Y1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VRTNQ9H8Y1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
VRTNQ9H8Y1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.9■■□□□ 1.26
VRTNQ9H8Y1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VRTNQ9H8Y1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.89■■□□□ 1.26
VRTNQ9H8Y1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.89■■□□□ 1.26
VRTNQ9H8Y1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.89■■□□□ 1.26
VRTNQ9H8Y1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.26
VRTNQ9H8Y1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.89■■□□□ 1.26
VRTNQ9H8Y1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
VRTNQ9H8Y1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.89■■□□□ 1.25
VRTNQ9H8Y1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
VRTNQ9H8Y1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
VRTNQ9H8Y1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.89■■□□□ 1.25
VRTNQ9H8Y1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.89■■□□□ 1.25
VRTNQ9H8Y1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
VRTNQ9H8Y1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms