Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
TMEM38AQ9H6F2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM38AQ9H6F2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM38AQ9H6F2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM38AQ9H6F2 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM38AQ9H6F2 AL034346.1-201ENST00000568244 1277 ntBASIC19.98■□□□□ 0.79
TMEM38AQ9H6F2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
TMEM38AQ9H6F2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM38AQ9H6F2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.98■□□□□ 0.79
TMEM38AQ9H6F2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
TMEM38AQ9H6F2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM38AQ9H6F2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
TMEM38AQ9H6F2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 DUX4L19-201ENST00000557448 1267 ntBASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM38AQ9H6F2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM38AQ9H6F2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM38AQ9H6F2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM38AQ9H6F2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM38AQ9H6F2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.95■□□□□ 0.78
TMEM38AQ9H6F2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM38AQ9H6F2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM38AQ9H6F2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM38AQ9H6F2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TMEM38AQ9H6F2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM38AQ9H6F2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM38AQ9H6F2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 AF106564.1-201ENST00000607058 2553 ntBASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 SERBP1P1-201ENST00000396021 1160 ntBASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 AP005435.1-201ENST00000529293 1178 ntBASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 SYT6-210ENST00000641643 1587 ntBASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM38AQ9H6F2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 AC011298.3-201ENST00000615796 283 ntBASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 AC136469.2-201ENST00000623944 1028 ntBASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM38AQ9H6F2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM38AQ9H6F2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM38AQ9H6F2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM38AQ9H6F2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM38AQ9H6F2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM38AQ9H6F2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM38AQ9H6F2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM38AQ9H6F2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM38AQ9H6F2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM38AQ9H6F2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM38AQ9H6F2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TMEM38AQ9H6F2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM38AQ9H6F2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM38AQ9H6F2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms