Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MAP1LC3AQ9H492 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MAP1LC3AQ9H492 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.64■□□□□ 0.09
MAP1LC3AQ9H492 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.64■□□□□ 0.09
MAP1LC3AQ9H492 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.64■□□□□ 0.09
MAP1LC3AQ9H492 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.64■□□□□ 0.09
MAP1LC3AQ9H492 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
MAP1LC3AQ9H492 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
MAP1LC3AQ9H492 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.64■□□□□ 0.09
MAP1LC3AQ9H492 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
MAP1LC3AQ9H492 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.64■□□□□ 0.09
MAP1LC3AQ9H492 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MAP1LC3AQ9H492 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MAP1LC3AQ9H492 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 LINC01006-201ENST00000333319 2292 ntBASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MAP1LC3AQ9H492 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MAP1LC3AQ9H492 LINC01529-204ENST00000636474 1715 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms