Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTFDC1Q9BY42 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTFDC1Q9BY42 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
RTFDC1Q9BY42 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
RTFDC1Q9BY42 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.32■■□□□ 1.8
RTFDC1Q9BY42 POU5F1P3-201ENST00000428824 1078 ntBASIC26.32■■□□□ 1.8
RTFDC1Q9BY42 EEF1DP3-203ENST00000566025 782 ntBASIC26.32■■□□□ 1.8
RTFDC1Q9BY42 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.32■■□□□ 1.8
RTFDC1Q9BY42 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.32■■□□□ 1.8
RTFDC1Q9BY42 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.32■■□□□ 1.8
RTFDC1Q9BY42 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.32■■□□□ 1.8
RTFDC1Q9BY42 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTFDC1Q9BY42 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTFDC1Q9BY42 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTFDC1Q9BY42 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTFDC1Q9BY42 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTFDC1Q9BY42 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.31■■□□□ 1.8
RTFDC1Q9BY42 AP004607.7-201ENST00000527152 1677 ntBASIC26.31■■□□□ 1.8
RTFDC1Q9BY42 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.31■■□□□ 1.8
RTFDC1Q9BY42 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 MIPEPP3-201ENST00000412105 444 ntBASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 CYP2T1P-201ENST00000432607 1285 ntBASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 ITM2C-210ENST00000620962 501 ntBASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.3■■□□□ 1.8
RTFDC1Q9BY42 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
RTFDC1Q9BY42 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.29■■□□□ 1.8
RTFDC1Q9BY42 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
RTFDC1Q9BY42 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RTFDC1Q9BY42 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
RTFDC1Q9BY42 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTFDC1Q9BY42 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.29■■□□□ 1.8
RTFDC1Q9BY42 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTFDC1Q9BY42 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
RTFDC1Q9BY42 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RTFDC1Q9BY42 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RTFDC1Q9BY42 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RTFDC1Q9BY42 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.28■■□□□ 1.8
RTFDC1Q9BY42 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.28■■□□□ 1.8
RTFDC1Q9BY42 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.28■■□□□ 1.8
RTFDC1Q9BY42 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.28■■□□□ 1.8
RTFDC1Q9BY42 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RTFDC1Q9BY42 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RTFDC1Q9BY42 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RTFDC1Q9BY42 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
RTFDC1Q9BY42 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.27■■□□□ 1.8
RTFDC1Q9BY42 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.27■■□□□ 1.8
RTFDC1Q9BY42 AC053503.5-201ENST00000601508 636 ntBASIC26.27■■□□□ 1.8
RTFDC1Q9BY42 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RTFDC1Q9BY42 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RTFDC1Q9BY42 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RTFDC1Q9BY42 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.26■■□□□ 1.79
RTFDC1Q9BY42 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.26■■□□□ 1.79
RTFDC1Q9BY42 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTFDC1Q9BY42 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.26■■□□□ 1.79
RTFDC1Q9BY42 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
RTFDC1Q9BY42 AC093827.2-201ENST00000512654 315 ntBASIC26.26■■□□□ 1.79
RTFDC1Q9BY42 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.26■■□□□ 1.79
RTFDC1Q9BY42 OR10C1-204ENST00000622521 1039 ntBASIC26.26■■□□□ 1.79
RTFDC1Q9BY42 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.26■■□□□ 1.79
RTFDC1Q9BY42 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.26■■□□□ 1.79
RTFDC1Q9BY42 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RTFDC1Q9BY42 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 LINC01960-201ENST00000563759 1884 ntBASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 AL512625.2-201ENST00000417533 625 ntBASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTFDC1Q9BY42 MKRN4P-201ENST00000444706 1521 ntBASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 AC092118.2-201ENST00000613495 667 ntBASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms