Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SLC6A7Q99884 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
SLC6A7Q99884 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A7Q99884 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC6A7Q99884 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A7Q99884 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A7Q99884 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SLC6A7Q99884 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
SLC6A7Q99884 AC010542.4-201ENST00000563151 1910 ntBASIC18.62■□□□□ 0.57
SLC6A7Q99884 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC6A7Q99884 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC6A7Q99884 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A7Q99884 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A7Q99884 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC6A7Q99884 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A7Q99884 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A7Q99884 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.62■□□□□ 0.57
SLC6A7Q99884 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A7Q99884 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SLC6A7Q99884 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SLC6A7Q99884 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SLC6A7Q99884 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A7Q99884 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC6A7Q99884 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A7Q99884 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A7Q99884 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A7Q99884 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A7Q99884 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC6A7Q99884 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC6A7Q99884 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A7Q99884 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC6A7Q99884 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A7Q99884 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC6A7Q99884 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SLC6A7Q99884 AC105265.2-201ENST00000467189 838 ntBASIC18.61■□□□□ 0.57
SLC6A7Q99884 AF213884.3-201ENST00000563833 479 ntBASIC18.61■□□□□ 0.57
SLC6A7Q99884 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC6A7Q99884 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A7Q99884 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A7Q99884 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A7Q99884 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A7Q99884 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SLC6A7Q99884 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A7Q99884 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A7Q99884 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A7Q99884 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A7Q99884 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC6A7Q99884 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC6A7Q99884 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC6A7Q99884 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A7Q99884 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.6■□□□□ 0.57
SLC6A7Q99884 AC092666.2-201ENST00000613287 246 ntBASIC18.6■□□□□ 0.57
SLC6A7Q99884 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SLC6A7Q99884 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A7Q99884 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC6A7Q99884 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC6A7Q99884 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC6A7Q99884 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC6A7Q99884 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A7Q99884 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SLC6A7Q99884 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SLC6A7Q99884 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC6A7Q99884 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SLC6A7Q99884 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A7Q99884 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A7Q99884 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC6A7Q99884 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A7Q99884 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A7Q99884 AC026271.2-201ENST00000428091 497 ntBASIC18.59■□□□□ 0.57
SLC6A7Q99884 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.59■□□□□ 0.57
SLC6A7Q99884 DUX4L19-201ENST00000557448 1267 ntBASIC18.59■□□□□ 0.57
SLC6A7Q99884 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC6A7Q99884 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC6A7Q99884 AC005229.4-201ENST00000610085 2198 ntBASIC18.59■□□□□ 0.57
SLC6A7Q99884 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC6A7Q99884 SYT6-210ENST00000641643 1587 ntBASIC18.59■□□□□ 0.57
SLC6A7Q99884 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC6A7Q99884 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A7Q99884 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A7Q99884 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A7Q99884 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A7Q99884 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A7Q99884 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A7Q99884 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A7Q99884 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A7Q99884 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A7Q99884 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.58■□□□□ 0.56
SLC6A7Q99884 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC6A7Q99884 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SLC6A7Q99884 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A7Q99884 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SLC6A7Q99884 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A7Q99884 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC6A7Q99884 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SLC6A7Q99884 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A7Q99884 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A7Q99884 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A7Q99884 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A7Q99884 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC6A7Q99884 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms