Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.93■□□□□ 0.94
NPAS2Q99743 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
NPAS2Q99743 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.93■□□□□ 0.94
NPAS2Q99743 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPAS2Q99743 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPAS2Q99743 AC244015.2-201ENST00000616358 1861 ntBASIC20.92■□□□□ 0.94
NPAS2Q99743 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPAS2Q99743 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPAS2Q99743 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
NPAS2Q99743 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPAS2Q99743 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.92■□□□□ 0.94
NPAS2Q99743 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPAS2Q99743 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPAS2Q99743 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPAS2Q99743 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NPAS2Q99743 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAS2Q99743 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAS2Q99743 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAS2Q99743 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAS2Q99743 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAS2Q99743 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.91■□□□□ 0.94
NPAS2Q99743 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAS2Q99743 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
NPAS2Q99743 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.91■□□□□ 0.94
NPAS2Q99743 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.91■□□□□ 0.94
NPAS2Q99743 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.91■□□□□ 0.94
NPAS2Q99743 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NPAS2Q99743 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPAS2Q99743 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NPAS2Q99743 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NPAS2Q99743 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.9■□□□□ 0.94
NPAS2Q99743 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.9■□□□□ 0.94
NPAS2Q99743 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS2Q99743 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS2Q99743 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.9■□□□□ 0.94
NPAS2Q99743 SERBP1P1-201ENST00000396021 1160 ntBASIC20.9■□□□□ 0.94
NPAS2Q99743 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.9■□□□□ 0.94
NPAS2Q99743 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS2Q99743 SUDS3P1-201ENST00000505831 966 ntBASIC20.9■□□□□ 0.94
NPAS2Q99743 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.9■□□□□ 0.94
NPAS2Q99743 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.9■□□□□ 0.94
NPAS2Q99743 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NPAS2Q99743 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS2Q99743 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.89■□□□□ 0.93
NPAS2Q99743 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAS2Q99743 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAS2Q99743 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAS2Q99743 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NPAS2Q99743 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.89■□□□□ 0.93
NPAS2Q99743 DUX4L19-201ENST00000557448 1267 ntBASIC20.89■□□□□ 0.93
NPAS2Q99743 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAS2Q99743 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAS2Q99743 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAS2Q99743 SYT6-210ENST00000641643 1587 ntBASIC20.89■□□□□ 0.93
NPAS2Q99743 FP325331.1-202ENST00000623531 1380 ntBASIC20.88■□□□□ 0.93
NPAS2Q99743 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS2Q99743 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS2Q99743 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS2Q99743 AC006455.2-201ENST00000429931 906 ntBASIC20.88■□□□□ 0.93
NPAS2Q99743 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.88■□□□□ 0.93
NPAS2Q99743 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NPAS2Q99743 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS2Q99743 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS2Q99743 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
NPAS2Q99743 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.88■□□□□ 0.93
NPAS2Q99743 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS2Q99743 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NPAS2Q99743 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS2Q99743 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NPAS2Q99743 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.87■□□□□ 0.93
NPAS2Q99743 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.87■□□□□ 0.93
NPAS2Q99743 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS2Q99743 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.87■□□□□ 0.93
NPAS2Q99743 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.87■□□□□ 0.93
NPAS2Q99743 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS2Q99743 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.87■□□□□ 0.93
NPAS2Q99743 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.87■□□□□ 0.93
NPAS2Q99743 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS2Q99743 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS2Q99743 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS2Q99743 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.86■□□□□ 0.93
NPAS2Q99743 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS2Q99743 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS2Q99743 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS2Q99743 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS2Q99743 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS2Q99743 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NPAS2Q99743 EDA-201ENST00000338901 1233 ntBASIC20.86■□□□□ 0.93
NPAS2Q99743 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS2Q99743 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS2Q99743 MIR935-201ENST00000401179 91 ntBASIC20.86■□□□□ 0.93
NPAS2Q99743 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.86■□□□□ 0.93
NPAS2Q99743 AC092171.4-201ENST00000609130 632 ntBASIC20.86■□□□□ 0.93
NPAS2Q99743 AC009086.3-201ENST00000623486 1008 ntBASIC20.86■□□□□ 0.93
NPAS2Q99743 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms