Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ITCHQ96J02 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.41■□□□□ 0.86
ITCHQ96J02 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ITCHQ96J02 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ITCHQ96J02 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ITCHQ96J02 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ITCHQ96J02 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITCHQ96J02 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
ITCHQ96J02 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ITCHQ96J02 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ITCHQ96J02 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.4■□□□□ 0.86
ITCHQ96J02 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.4■□□□□ 0.86
ITCHQ96J02 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITCHQ96J02 AC099791.2-201ENST00000605725 427 ntBASIC20.4■□□□□ 0.86
ITCHQ96J02 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.4■□□□□ 0.86
ITCHQ96J02 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
ITCHQ96J02 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.4■□□□□ 0.86
ITCHQ96J02 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ITCHQ96J02 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITCHQ96J02 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ITCHQ96J02 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.39■□□□□ 0.86
ITCHQ96J02 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ITCHQ96J02 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ITCHQ96J02 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.39■□□□□ 0.86
ITCHQ96J02 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ITCHQ96J02 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ITCHQ96J02 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ITCHQ96J02 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ITCHQ96J02 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.39■□□□□ 0.85
ITCHQ96J02 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ITCHQ96J02 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.39■□□□□ 0.85
ITCHQ96J02 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ITCHQ96J02 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITCHQ96J02 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITCHQ96J02 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ITCHQ96J02 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITCHQ96J02 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ITCHQ96J02 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.38■□□□□ 0.85
ITCHQ96J02 AC104564.3-201ENST00000582367 638 ntBASIC20.38■□□□□ 0.85
ITCHQ96J02 AL356740.2-201ENST00000601559 647 ntBASIC20.38■□□□□ 0.85
ITCHQ96J02 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ITCHQ96J02 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITCHQ96J02 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITCHQ96J02 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ITCHQ96J02 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITCHQ96J02 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
ITCHQ96J02 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.38■□□□□ 0.85
ITCHQ96J02 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.37■□□□□ 0.85
ITCHQ96J02 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.37■□□□□ 0.85
ITCHQ96J02 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
ITCHQ96J02 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ITCHQ96J02 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ITCHQ96J02 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ITCHQ96J02 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ITCHQ96J02 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.37■□□□□ 0.85
ITCHQ96J02 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ITCHQ96J02 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.37■□□□□ 0.85
ITCHQ96J02 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ITCHQ96J02 AC087239.1-201ENST00000622671 572 ntBASIC20.37■□□□□ 0.85
ITCHQ96J02 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.37■□□□□ 0.85
ITCHQ96J02 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ITCHQ96J02 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.37■□□□□ 0.85
ITCHQ96J02 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
ITCHQ96J02 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ITCHQ96J02 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.36■□□□□ 0.85
ITCHQ96J02 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
ITCHQ96J02 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.36■□□□□ 0.85
ITCHQ96J02 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ITCHQ96J02 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.36■□□□□ 0.85
ITCHQ96J02 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ITCHQ96J02 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ITCHQ96J02 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ITCHQ96J02 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ITCHQ96J02 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ITCHQ96J02 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ITCHQ96J02 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.36■□□□□ 0.85
ITCHQ96J02 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ITCHQ96J02 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
ITCHQ96J02 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ITCHQ96J02 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ITCHQ96J02 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.35■□□□□ 0.85
ITCHQ96J02 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ITCHQ96J02 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.35■□□□□ 0.85
ITCHQ96J02 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ITCHQ96J02 OR2I1P-207ENST00000453522 948 ntBASIC20.35■□□□□ 0.85
ITCHQ96J02 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.35■□□□□ 0.85
ITCHQ96J02 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ITCHQ96J02 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ITCHQ96J02 MIR3181-201ENST00000578512 73 ntBASIC20.35■□□□□ 0.85
ITCHQ96J02 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.35■□□□□ 0.85
ITCHQ96J02 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.35■□□□□ 0.85
ITCHQ96J02 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ITCHQ96J02 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ITCHQ96J02 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.35■□□□□ 0.85
ITCHQ96J02 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.35■□□□□ 0.85
ITCHQ96J02 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.35■□□□□ 0.85
ITCHQ96J02 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ITCHQ96J02 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ITCHQ96J02 AC026471.6-201ENST00000622954 1905 ntBASIC20.35■□□□□ 0.85
ITCHQ96J02 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms