Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 AL035685.1-201ENST00000636663 812 ntBASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SLC47A1Q96FL8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 C17orf82-201ENST00000623772 1530 ntBASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC47A1Q96FL8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC47A1Q96FL8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC47A1Q96FL8 KRT16P3-201ENST00000439127 1283 ntBASIC20.16■□□□□ 0.82
SLC47A1Q96FL8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC47A1Q96FL8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC47A1Q96FL8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC47A1Q96FL8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SLC47A1Q96FL8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC47A1Q96FL8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC47A1Q96FL8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC47A1Q96FL8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC47A1Q96FL8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC47A1Q96FL8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC47A1Q96FL8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SLC47A1Q96FL8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC47A1Q96FL8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC47A1Q96FL8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC47A1Q96FL8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC47A1Q96FL8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC47A1Q96FL8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC47A1Q96FL8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC47A1Q96FL8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SLC47A1Q96FL8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
SLC47A1Q96FL8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC47A1Q96FL8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC47A1Q96FL8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 AL157384.1-201ENST00000445995 2473 ntBASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 AL117332.1-201ENST00000622628 974 ntBASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms