Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 KRT18P29-201ENST00000397031 1267 ntBASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 TERF1P5-201ENST00000477545 1207 ntBASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 AC079089.2-201ENST00000531211 1277 ntBASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.4■□□□□ 0.7
SNRNP40Q96DI7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNRNP40Q96DI7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNRNP40Q96DI7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
SNRNP40Q96DI7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.39■□□□□ 0.7
SNRNP40Q96DI7 MIPEPP3-201ENST00000412105 444 ntBASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 AC068338.2-201ENST00000563278 1430 ntBASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 MKRN4P-201ENST00000444706 1521 ntBASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 AP004607.7-201ENST00000527152 1677 ntBASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.39■□□□□ 0.69
SNRNP40Q96DI7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.38■□□□□ 0.69
SNRNP40Q96DI7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP40Q96DI7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.38■□□□□ 0.69
SNRNP40Q96DI7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP40Q96DI7 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.38■□□□□ 0.69
SNRNP40Q96DI7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.38■□□□□ 0.69
SNRNP40Q96DI7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP40Q96DI7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRNP40Q96DI7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.38■□□□□ 0.69
SNRNP40Q96DI7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 CYP2T1P-201ENST00000432607 1285 ntBASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 SLC7A5P1-201ENST00000568957 537 ntBASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.37■□□□□ 0.69
SNRNP40Q96DI7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.36■□□□□ 0.69
SNRNP40Q96DI7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP40Q96DI7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP40Q96DI7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP40Q96DI7 PRORSD1P-201ENST00000295112 541 ntBASIC19.35■□□□□ 0.69
SNRNP40Q96DI7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP40Q96DI7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.35■□□□□ 0.69
SNRNP40Q96DI7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP40Q96DI7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.35■□□□□ 0.69
SNRNP40Q96DI7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.35■□□□□ 0.69
SNRNP40Q96DI7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.35■□□□□ 0.69
SNRNP40Q96DI7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP40Q96DI7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms