Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
NCLNQ969V3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.71■□□□□ 0.91
NCLNQ969V3 AL355001.2-201ENST00000620617 1191 ntBASIC20.71■□□□□ 0.91
NCLNQ969V3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCLNQ969V3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
NCLNQ969V3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCLNQ969V3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCLNQ969V3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCLNQ969V3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCLNQ969V3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.71■□□□□ 0.91
NCLNQ969V3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.71■□□□□ 0.91
NCLNQ969V3 AC019069.1-201ENST00000610008 1333 ntBASIC20.71■□□□□ 0.91
NCLNQ969V3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCLNQ969V3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.71■□□□□ 0.91
NCLNQ969V3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLNQ969V3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLNQ969V3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.7■□□□□ 0.9
NCLNQ969V3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLNQ969V3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.7■□□□□ 0.9
NCLNQ969V3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.7■□□□□ 0.9
NCLNQ969V3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.7■□□□□ 0.9
NCLNQ969V3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.7■□□□□ 0.9
NCLNQ969V3 AL031432.3-201ENST00000607698 485 ntBASIC20.7■□□□□ 0.9
NCLNQ969V3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NCLNQ969V3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLNQ969V3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
NCLNQ969V3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLNQ969V3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLNQ969V3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.7■□□□□ 0.9
NCLNQ969V3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCLNQ969V3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.7■□□□□ 0.9
NCLNQ969V3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.7■□□□□ 0.9
NCLNQ969V3 AC133637.1-201ENST00000624115 1537 ntBASIC20.69■□□□□ 0.9
NCLNQ969V3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.69■□□□□ 0.9
NCLNQ969V3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.69■□□□□ 0.9
NCLNQ969V3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.69■□□□□ 0.9
NCLNQ969V3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.69■□□□□ 0.9
NCLNQ969V3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.69■□□□□ 0.9
NCLNQ969V3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.69■□□□□ 0.9
NCLNQ969V3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NCLNQ969V3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
NCLNQ969V3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NCLNQ969V3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NCLNQ969V3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.69■□□□□ 0.9
NCLNQ969V3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCLNQ969V3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLNQ969V3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.68■□□□□ 0.9
NCLNQ969V3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NCLNQ969V3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCLNQ969V3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.68■□□□□ 0.9
NCLNQ969V3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.68■□□□□ 0.9
NCLNQ969V3 AC142381.2-201ENST00000566120 298 ntBASIC20.68■□□□□ 0.9
NCLNQ969V3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NCLNQ969V3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NCLNQ969V3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NCLNQ969V3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NCLNQ969V3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.67■□□□□ 0.9
NCLNQ969V3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.67■□□□□ 0.9
NCLNQ969V3 AF213884.3-201ENST00000563833 479 ntBASIC20.67■□□□□ 0.9
NCLNQ969V3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.67■□□□□ 0.9
NCLNQ969V3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.67■□□□□ 0.9
NCLNQ969V3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NCLNQ969V3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NCLNQ969V3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLNQ969V3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCLNQ969V3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.66■□□□□ 0.9
NCLNQ969V3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCLNQ969V3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.66■□□□□ 0.9
NCLNQ969V3 SUDS3P1-201ENST00000505831 966 ntBASIC20.66■□□□□ 0.9
NCLNQ969V3 AP001330.3-201ENST00000520123 633 ntBASIC20.66■□□□□ 0.9
NCLNQ969V3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.66■□□□□ 0.9
NCLNQ969V3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.66■□□□□ 0.9
NCLNQ969V3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCLNQ969V3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCLNQ969V3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms