Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM54Q969K7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM54Q969K7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM54Q969K7 AC010542.4-201ENST00000563151 1910 ntBASIC18.98■□□□□ 0.63
TMEM54Q969K7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM54Q969K7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM54Q969K7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
TMEM54Q969K7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM54Q969K7 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM54Q969K7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM54Q969K7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
TMEM54Q969K7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM54Q969K7 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.97■□□□□ 0.63
TMEM54Q969K7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM54Q969K7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TMEM54Q969K7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.97■□□□□ 0.63
TMEM54Q969K7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM54Q969K7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM54Q969K7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM54Q969K7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.97■□□□□ 0.63
TMEM54Q969K7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM54Q969K7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM54Q969K7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM54Q969K7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM54Q969K7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM54Q969K7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM54Q969K7 AC026471.6-201ENST00000622954 1905 ntBASIC18.96■□□□□ 0.63
TMEM54Q969K7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM54Q969K7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TMEM54Q969K7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM54Q969K7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.96■□□□□ 0.63
TMEM54Q969K7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM54Q969K7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM54Q969K7 AC105265.2-201ENST00000467189 838 ntBASIC18.96■□□□□ 0.63
TMEM54Q969K7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM54Q969K7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.96■□□□□ 0.63
TMEM54Q969K7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.96■□□□□ 0.63
TMEM54Q969K7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM54Q969K7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM54Q969K7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM54Q969K7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM54Q969K7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM54Q969K7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM54Q969K7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEM54Q969K7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.95■□□□□ 0.62
TMEM54Q969K7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEM54Q969K7 AC012414.1-201ENST00000556676 535 ntBASIC18.95■□□□□ 0.62
TMEM54Q969K7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM54Q969K7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM54Q969K7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.95■□□□□ 0.62
TMEM54Q969K7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM54Q969K7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM54Q969K7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM54Q969K7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM54Q969K7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
TMEM54Q969K7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM54Q969K7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM54Q969K7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.94■□□□□ 0.62
TMEM54Q969K7 FBXW4P1-201ENST00000426721 2239 ntBASIC18.94■□□□□ 0.62
TMEM54Q969K7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM54Q969K7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM54Q969K7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM54Q969K7 AP006587.3-201ENST00000525742 1516 ntBASIC18.94■□□□□ 0.62
TMEM54Q969K7 BX005040.4-201ENST00000637145 1518 ntBASIC18.94■□□□□ 0.62
TMEM54Q969K7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM54Q969K7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM54Q969K7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 AC009237.3-201ENST00000393279 1427 ntBASIC18.93■□□□□ 0.62
TMEM54Q969K7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 IRS3P-201ENST00000223076 1006 ntBASIC18.93■□□□□ 0.62
TMEM54Q969K7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM54Q969K7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM54Q969K7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 AL354811.1-201ENST00000610286 706 ntBASIC18.93■□□□□ 0.62
TMEM54Q969K7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM54Q969K7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM54Q969K7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM54Q969K7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TMEM54Q969K7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM54Q969K7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM54Q969K7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM54Q969K7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM54Q969K7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TMEM54Q969K7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TMEM54Q969K7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM54Q969K7 AL358852.1-201ENST00000623174 1268 ntBASIC18.92■□□□□ 0.62
TMEM54Q969K7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TMEM54Q969K7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM54Q969K7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM54Q969K7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM54Q969K7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms