Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 PRORSD1P-201ENST00000295112 541 ntBASIC27.73■■■□□ 2.03
SMARCC1Q92922 NAA20-201ENST00000310450 920 ntTSL 2 BASIC27.73■■■□□ 2.03
SMARCC1Q92922 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC27.73■■■□□ 2.03
SMARCC1Q92922 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.73■■■□□ 2.03
SMARCC1Q92922 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC27.73■■■□□ 2.03
SMARCC1Q92922 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC27.73■■■□□ 2.03
SMARCC1Q92922 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SMARCC1Q92922 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.73■■■□□ 2.03
SMARCC1Q92922 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
SMARCC1Q92922 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SMARCC1Q92922 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC27.72■■■□□ 2.03
SMARCC1Q92922 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SMARCC1Q92922 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC27.72■■■□□ 2.03
SMARCC1Q92922 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.72■■■□□ 2.03
SMARCC1Q92922 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SMARCC1Q92922 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC27.72■■■□□ 2.03
SMARCC1Q92922 AL034346.1-201ENST00000568244 1277 ntBASIC27.72■■■□□ 2.03
SMARCC1Q92922 AC053503.5-201ENST00000601508 636 ntBASIC27.72■■■□□ 2.03
SMARCC1Q92922 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SMARCC1Q92922 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.72■■■□□ 2.03
SMARCC1Q92922 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SMARCC1Q92922 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SMARCC1Q92922 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
SMARCC1Q92922 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SMARCC1Q92922 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
SMARCC1Q92922 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SMARCC1Q92922 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SMARCC1Q92922 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC27.71■■■□□ 2.03
SMARCC1Q92922 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
SMARCC1Q92922 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC27.71■■■□□ 2.03
SMARCC1Q92922 AC008694.1-202ENST00000636953 945 ntBASIC27.71■■■□□ 2.03
SMARCC1Q92922 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.71■■■□□ 2.03
SMARCC1Q92922 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SMARCC1Q92922 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
SMARCC1Q92922 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SMARCC1Q92922 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
SMARCC1Q92922 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SMARCC1Q92922 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SMARCC1Q92922 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SMARCC1Q92922 AC069236.1-201ENST00000604339 616 ntBASIC27.7■■■□□ 2.02
SMARCC1Q92922 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
SMARCC1Q92922 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SMARCC1Q92922 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.69■■■□□ 2.02
SMARCC1Q92922 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.69■■■□□ 2.02
SMARCC1Q92922 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
SMARCC1Q92922 PLLP-204ENST00000569059 665 ntTSL 3 BASIC27.69■■■□□ 2.02
SMARCC1Q92922 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
SMARCC1Q92922 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SMARCC1Q92922 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC27.69■■■□□ 2.02
SMARCC1Q92922 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SMARCC1Q92922 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC27.68■■■□□ 2.02
SMARCC1Q92922 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.68■■■□□ 2.02
SMARCC1Q92922 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMARCC1Q92922 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMARCC1Q92922 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.68■■■□□ 2.02
SMARCC1Q92922 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMARCC1Q92922 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC27.68■■■□□ 2.02
SMARCC1Q92922 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SMARCC1Q92922 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
SMARCC1Q92922 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC27.68■■■□□ 2.02
SMARCC1Q92922 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC27.68■■■□□ 2.02
SMARCC1Q92922 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.68■■■□□ 2.02
SMARCC1Q92922 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
SMARCC1Q92922 LINC01960-201ENST00000563759 1884 ntBASIC27.68■■■□□ 2.02
SMARCC1Q92922 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC1Q92922 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.67■■■□□ 2.02
SMARCC1Q92922 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC1Q92922 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC1Q92922 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC27.67■■■□□ 2.02
SMARCC1Q92922 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC27.67■■■□□ 2.02
SMARCC1Q92922 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
SMARCC1Q92922 AC093787.1-201ENST00000450396 207 ntBASIC27.67■■■□□ 2.02
SMARCC1Q92922 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
SMARCC1Q92922 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC27.67■■■□□ 2.02
SMARCC1Q92922 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.67■■■□□ 2.02
SMARCC1Q92922 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.67■■■□□ 2.02
SMARCC1Q92922 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMARCC1Q92922 OR7E47P-201ENST00000546390 1422 ntBASIC27.67■■■□□ 2.02
SMARCC1Q92922 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SMARCC1Q92922 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC27.66■■■□□ 2.02
SMARCC1Q92922 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC27.66■■■□□ 2.02
SMARCC1Q92922 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC27.66■■■□□ 2.02
SMARCC1Q92922 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC27.66■■■□□ 2.02
SMARCC1Q92922 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC27.66■■■□□ 2.02
SMARCC1Q92922 AC016405.3-201ENST00000607710 860 ntBASIC27.66■■■□□ 2.02
SMARCC1Q92922 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SMARCC1Q92922 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SMARCC1Q92922 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
SMARCC1Q92922 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SMARCC1Q92922 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
SMARCC1Q92922 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC27.65■■■□□ 2.02
SMARCC1Q92922 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC27.65■■■□□ 2.02
SMARCC1Q92922 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
SMARCC1Q92922 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
SMARCC1Q92922 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMARCC1Q92922 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMARCC1Q92922 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
SMARCC1Q92922 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMARCC1Q92922 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMARCC1Q92922 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC27.64■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms