Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TM9SF4Q92544 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TM9SF4Q92544 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TM9SF4Q92544 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TM9SF4Q92544 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.23■□□□□ 0.83
TM9SF4Q92544 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TM9SF4Q92544 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.23■□□□□ 0.83
TM9SF4Q92544 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.23■□□□□ 0.83
TM9SF4Q92544 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF4Q92544 AC007375.3-201ENST00000600936 2314 ntBASIC20.22■□□□□ 0.83
TM9SF4Q92544 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.22■□□□□ 0.83
TM9SF4Q92544 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF4Q92544 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.22■□□□□ 0.83
TM9SF4Q92544 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF4Q92544 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF4Q92544 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.22■□□□□ 0.83
TM9SF4Q92544 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.22■□□□□ 0.83
TM9SF4Q92544 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF4Q92544 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF4Q92544 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF4Q92544 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF4Q92544 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF4Q92544 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM9SF4Q92544 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM9SF4Q92544 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM9SF4Q92544 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM9SF4Q92544 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TM9SF4Q92544 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM9SF4Q92544 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM9SF4Q92544 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.21■□□□□ 0.83
TM9SF4Q92544 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF4Q92544 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF4Q92544 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF4Q92544 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF4Q92544 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF4Q92544 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF4Q92544 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.2■□□□□ 0.82
TM9SF4Q92544 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.2■□□□□ 0.82
TM9SF4Q92544 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF4Q92544 AC137761.2-201ENST00000561729 223 ntBASIC20.2■□□□□ 0.82
TM9SF4Q92544 AC145350.3-201ENST00000569033 163 ntBASIC20.2■□□□□ 0.82
TM9SF4Q92544 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TM9SF4Q92544 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF4Q92544 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF4Q92544 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF4Q92544 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF4Q92544 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF4Q92544 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.2■□□□□ 0.82
TM9SF4Q92544 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF4Q92544 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF4Q92544 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.19■□□□□ 0.82
TM9SF4Q92544 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF4Q92544 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF4Q92544 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF4Q92544 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF4Q92544 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.19■□□□□ 0.82
TM9SF4Q92544 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.19■□□□□ 0.82
TM9SF4Q92544 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
TM9SF4Q92544 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF4Q92544 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.19■□□□□ 0.82
TM9SF4Q92544 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.19■□□□□ 0.82
TM9SF4Q92544 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.19■□□□□ 0.82
TM9SF4Q92544 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF4Q92544 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TM9SF4Q92544 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF4Q92544 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF4Q92544 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.18■□□□□ 0.82
TM9SF4Q92544 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF4Q92544 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TM9SF4Q92544 BX005040.4-201ENST00000637145 1518 ntBASIC20.18■□□□□ 0.82
TM9SF4Q92544 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TM9SF4Q92544 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.18■□□□□ 0.82
TM9SF4Q92544 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF4Q92544 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF4Q92544 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF4Q92544 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.18■□□□□ 0.82
TM9SF4Q92544 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF4Q92544 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF4Q92544 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF4Q92544 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TM9SF4Q92544 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF4Q92544 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM9SF4Q92544 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TM9SF4Q92544 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM9SF4Q92544 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TM9SF4Q92544 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TM9SF4Q92544 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms