Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
CCHCR1Q8TD31 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCHCR1Q8TD31 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCHCR1Q8TD31 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
CCHCR1Q8TD31 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCHCR1Q8TD31 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCHCR1Q8TD31 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCHCR1Q8TD31 AC006455.2-201ENST00000429931 906 ntBASIC22.29■■□□□ 1.16
CCHCR1Q8TD31 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCHCR1Q8TD31 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.29■■□□□ 1.16
CCHCR1Q8TD31 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.29■■□□□ 1.16
CCHCR1Q8TD31 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.29■■□□□ 1.16
CCHCR1Q8TD31 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 UNC93B3-201ENST00000308076 687 ntBASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 AC096631.2-201ENST00000436136 790 ntBASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 AL138724.1-201ENST00000606771 1088 ntBASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 pRNA.6-201ENST00000610482 90 ntBASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 pRNA.5-201ENST00000612139 90 ntBASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 pRNA.11-201ENST00000618423 90 ntBASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 pRNA.13-201ENST00000619112 90 ntBASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCHCR1Q8TD31 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.27■■□□□ 1.16
CCHCR1Q8TD31 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CCHCR1Q8TD31 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCHCR1Q8TD31 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 SERBP1P1-201ENST00000396021 1160 ntBASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 MIR3181-201ENST00000578512 73 ntBASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CCHCR1Q8TD31 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 AL136162.1-201ENST00000607711 1078 ntBASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 AL031602.1-201ENST00000633169 911 ntBASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCHCR1Q8TD31 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms