Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.18■□□□□ 0.98
RFWD2Q8NHY2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFWD2Q8NHY2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.17■□□□□ 0.98
RFWD2Q8NHY2 AC103724.3-201ENST00000564481 992 ntBASIC21.17■□□□□ 0.98
RFWD2Q8NHY2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.17■□□□□ 0.98
RFWD2Q8NHY2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.17■□□□□ 0.98
RFWD2Q8NHY2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFWD2Q8NHY2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFWD2Q8NHY2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFWD2Q8NHY2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFWD2Q8NHY2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RFWD2Q8NHY2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFWD2Q8NHY2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFWD2Q8NHY2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD2Q8NHY2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RFWD2Q8NHY2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.15■□□□□ 0.98
RFWD2Q8NHY2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD2Q8NHY2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RFWD2Q8NHY2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFWD2Q8NHY2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RFWD2Q8NHY2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RFWD2Q8NHY2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.14■□□□□ 0.98
RFWD2Q8NHY2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFWD2Q8NHY2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFWD2Q8NHY2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFWD2Q8NHY2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.14■□□□□ 0.97
RFWD2Q8NHY2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.14■□□□□ 0.97
RFWD2Q8NHY2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD2Q8NHY2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.13■□□□□ 0.97
RFWD2Q8NHY2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD2Q8NHY2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RFWD2Q8NHY2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RFWD2Q8NHY2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD2Q8NHY2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD2Q8NHY2 AL031848.2-201ENST00000607670 837 ntBASIC21.13■□□□□ 0.97
RFWD2Q8NHY2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFWD2Q8NHY2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.13■□□□□ 0.97
RFWD2Q8NHY2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 RARRES2P1-201ENST00000474487 481 ntBASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFWD2Q8NHY2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.11■□□□□ 0.97
RFWD2Q8NHY2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD2Q8NHY2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.11■□□□□ 0.97
RFWD2Q8NHY2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RFWD2Q8NHY2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
RFWD2Q8NHY2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD2Q8NHY2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.11■□□□□ 0.97
RFWD2Q8NHY2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD2Q8NHY2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD2Q8NHY2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD2Q8NHY2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD2Q8NHY2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD2Q8NHY2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms