Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 CA15P2-201ENST00000611168 834 ntBASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.81■□□□□ 0.6
DNAAF1Q8NEP3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 UNC93B8-201ENST00000511903 705 ntBASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 AL499627.2-201ENST00000606283 725 ntBASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 Z98882.1-201ENST00000622160 2253 ntBASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNAAF1Q8NEP3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 AL117332.1-201ENST00000622628 974 ntBASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 AC241377.3-202ENST00000626088 1088 ntBASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 AC241585.3-202ENST00000628937 1088 ntBASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 AC245100.8-202ENST00000629247 1058 ntBASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNAAF1Q8NEP3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.78■□□□□ 0.6
DNAAF1Q8NEP3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
DNAAF1Q8NEP3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DNAAF1Q8NEP3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DNAAF1Q8NEP3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DNAAF1Q8NEP3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.77■□□□□ 0.59
DNAAF1Q8NEP3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DNAAF1Q8NEP3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNAAF1Q8NEP3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DNAAF1Q8NEP3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNAAF1Q8NEP3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNAAF1Q8NEP3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DNAAF1Q8NEP3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNAAF1Q8NEP3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.76■□□□□ 0.59
DNAAF1Q8NEP3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms