Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KDM1BQ8NB78 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
KDM1BQ8NB78 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KDM1BQ8NB78 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
KDM1BQ8NB78 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
KDM1BQ8NB78 AP004607.4-201ENST00000530158 1459 ntBASIC21.96■■□□□ 1.11
KDM1BQ8NB78 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.96■■□□□ 1.11
KDM1BQ8NB78 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
KDM1BQ8NB78 AC005224.4-201ENST00000583262 1652 ntBASIC21.96■■□□□ 1.11
KDM1BQ8NB78 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.96■■□□□ 1.11
KDM1BQ8NB78 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.96■■□□□ 1.11
KDM1BQ8NB78 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.96■■□□□ 1.11
KDM1BQ8NB78 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.96■■□□□ 1.11
KDM1BQ8NB78 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.96■■□□□ 1.11
KDM1BQ8NB78 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.96■■□□□ 1.11
KDM1BQ8NB78 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
KDM1BQ8NB78 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
KDM1BQ8NB78 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KDM1BQ8NB78 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KDM1BQ8NB78 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 KRT18P61-201ENST00000585825 1298 ntBASIC21.94■■□□□ 1.1
KDM1BQ8NB78 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
KDM1BQ8NB78 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
KDM1BQ8NB78 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KDM1BQ8NB78 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KDM1BQ8NB78 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.93■■□□□ 1.1
KDM1BQ8NB78 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.93■■□□□ 1.1
KDM1BQ8NB78 AC079140.4-201ENST00000507448 529 ntBASIC21.93■■□□□ 1.1
KDM1BQ8NB78 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KDM1BQ8NB78 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.93■■□□□ 1.1
KDM1BQ8NB78 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.93■■□□□ 1.1
KDM1BQ8NB78 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
KDM1BQ8NB78 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
KDM1BQ8NB78 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.92■■□□□ 1.1
KDM1BQ8NB78 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KDM1BQ8NB78 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KDM1BQ8NB78 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KDM1BQ8NB78 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.92■■□□□ 1.1
KDM1BQ8NB78 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KDM1BQ8NB78 KRT19P1-201ENST00000405746 1186 ntBASIC21.92■■□□□ 1.1
KDM1BQ8NB78 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.92■■□□□ 1.1
KDM1BQ8NB78 AC127496.7-201ENST00000625110 1798 ntBASIC21.92■■□□□ 1.1
KDM1BQ8NB78 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 AC004854.2-201ENST00000608450 1441 ntBASIC21.91■■□□□ 1.1
KDM1BQ8NB78 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 AC006015.1-201ENST00000429970 570 ntBASIC21.91■■□□□ 1.1
KDM1BQ8NB78 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 RARRES2P11-201ENST00000635158 484 ntBASIC21.91■■□□□ 1.1
KDM1BQ8NB78 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KDM1BQ8NB78 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KDM1BQ8NB78 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KDM1BQ8NB78 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms