Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYNPOQ8N3V7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYNPOQ8N3V7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SYNPOQ8N3V7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.89■■□□□ 1.1
SYNPOQ8N3V7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SYNPOQ8N3V7 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.89■■□□□ 1.09
SYNPOQ8N3V7 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.89■■□□□ 1.09
SYNPOQ8N3V7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
SYNPOQ8N3V7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SYNPOQ8N3V7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
SYNPOQ8N3V7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.89■■□□□ 1.09
SYNPOQ8N3V7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SYNPOQ8N3V7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SYNPOQ8N3V7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 CNN2P6-201ENST00000439038 900 ntBASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 AC010141.2-201ENST00000452426 721 ntBASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 AC138907.5-202ENST00000569484 235 ntBASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 ABCB10P4-201ENST00000566803 2184 ntBASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.88■■□□□ 1.09
SYNPOQ8N3V7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPOQ8N3V7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPOQ8N3V7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.87■■□□□ 1.09
SYNPOQ8N3V7 AC133561.1-201ENST00000568600 2415 ntBASIC21.87■■□□□ 1.09
SYNPOQ8N3V7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPOQ8N3V7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SYNPOQ8N3V7 FAM201B-201ENST00000458407 597 ntBASIC21.87■■□□□ 1.09
SYNPOQ8N3V7 SLC7A5P1-201ENST00000568957 537 ntBASIC21.87■■□□□ 1.09
SYNPOQ8N3V7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.87■■□□□ 1.09
SYNPOQ8N3V7 AC010536.3-201ENST00000620306 533 ntBASIC21.87■■□□□ 1.09
SYNPOQ8N3V7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPOQ8N3V7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPOQ8N3V7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPOQ8N3V7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.86■■□□□ 1.09
SYNPOQ8N3V7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.86■■□□□ 1.09
SYNPOQ8N3V7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPOQ8N3V7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SYNPOQ8N3V7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPOQ8N3V7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.86■■□□□ 1.09
SYNPOQ8N3V7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
SYNPOQ8N3V7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPOQ8N3V7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SYNPOQ8N3V7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 AC105036.2-201ENST00000569468 176 ntBASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SYNPOQ8N3V7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 AC012676.1-201ENST00000574705 1949 ntBASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 AC079089.2-201ENST00000531211 1277 ntBASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYNPOQ8N3V7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SYNPOQ8N3V7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.83■■□□□ 1.09
SYNPOQ8N3V7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SYNPOQ8N3V7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SYNPOQ8N3V7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SYNPOQ8N3V7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SYNPOQ8N3V7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.83■■□□□ 1.09
SYNPOQ8N3V7 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.83■■□□□ 1.09
SYNPOQ8N3V7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.83■■□□□ 1.09
SYNPOQ8N3V7 AC013268.1-206ENST00000638368 961 ntBASIC21.83■■□□□ 1.09
SYNPOQ8N3V7 AC112229.1-201ENST00000639295 961 ntBASIC21.83■■□□□ 1.09
SYNPOQ8N3V7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SYNPOQ8N3V7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms