Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01561Q8N1V8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 AC005229.4-201ENST00000610085 2198 ntBASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 MIR6724-1-201ENST00000616420 92 ntBASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 MIR6724-2-201ENST00000616483 92 ntBASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 MIR6724-4-201ENST00000617390 92 ntBASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 MIR6724-3-201ENST00000622482 92 ntBASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01561Q8N1V8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 AL451085.2-201ENST00000605085 799 ntBASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01561Q8N1V8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 OR2I1P-207ENST00000453522 948 ntBASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01561Q8N1V8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms