Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
ABCA6Q8N139 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC32.26■■■□□ 2.76
ABCA6Q8N139 ESRRAP1-201ENST00000400596 1257 ntBASIC32.26■■■□□ 2.76
ABCA6Q8N139 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC32.26■■■□□ 2.76
ABCA6Q8N139 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
ABCA6Q8N139 AC006058.3-201ENST00000606217 1069 ntBASIC32.26■■■□□ 2.76
ABCA6Q8N139 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
ABCA6Q8N139 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
ABCA6Q8N139 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
ABCA6Q8N139 AL512625.2-201ENST00000417533 625 ntBASIC32.26■■■□□ 2.75
ABCA6Q8N139 AC091874.3-201ENST00000512672 1195 ntBASIC32.26■■■□□ 2.75
ABCA6Q8N139 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC32.26■■■□□ 2.75
ABCA6Q8N139 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC32.26■■■□□ 2.75
ABCA6Q8N139 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC32.26■■■□□ 2.75
ABCA6Q8N139 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
ABCA6Q8N139 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC32.25■■■□□ 2.75
ABCA6Q8N139 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
ABCA6Q8N139 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
ABCA6Q8N139 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC32.25■■■□□ 2.75
ABCA6Q8N139 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
ABCA6Q8N139 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
ABCA6Q8N139 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC32.24■■■□□ 2.75
ABCA6Q8N139 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
ABCA6Q8N139 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
ABCA6Q8N139 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
ABCA6Q8N139 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
ABCA6Q8N139 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC32.24■■■□□ 2.75
ABCA6Q8N139 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC32.24■■■□□ 2.75
ABCA6Q8N139 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
ABCA6Q8N139 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
ABCA6Q8N139 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC32.24■■■□□ 2.75
ABCA6Q8N139 AC069236.1-201ENST00000604339 616 ntBASIC32.24■■■□□ 2.75
ABCA6Q8N139 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
ABCA6Q8N139 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC32.24■■■□□ 2.75
ABCA6Q8N139 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC32.24■■■□□ 2.75
ABCA6Q8N139 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
ABCA6Q8N139 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC32.23■■■□□ 2.75
ABCA6Q8N139 AL158047.1-201ENST00000445918 881 ntBASIC32.23■■■□□ 2.75
ABCA6Q8N139 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC32.23■■■□□ 2.75
ABCA6Q8N139 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
ABCA6Q8N139 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC32.23■■■□□ 2.75
ABCA6Q8N139 AL139125.2-201ENST00000623134 1869 ntBASIC32.23■■■□□ 2.75
ABCA6Q8N139 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
ABCA6Q8N139 AC004812.2-201ENST00000611079 2094 ntBASIC32.22■■■□□ 2.75
ABCA6Q8N139 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
ABCA6Q8N139 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
ABCA6Q8N139 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
ABCA6Q8N139 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
ABCA6Q8N139 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
ABCA6Q8N139 ISCU-212ENST00000547005 795 ntTSL 3 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 INO80E-214ENST00000620599 515 ntTSL 2 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 AP006587.3-201ENST00000525742 1516 ntBASIC32.22■■■□□ 2.75
ABCA6Q8N139 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
ABCA6Q8N139 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC32.22■■■□□ 2.75
ABCA6Q8N139 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC32.21■■■□□ 2.75
ABCA6Q8N139 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC32.21■■■□□ 2.75
ABCA6Q8N139 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
ABCA6Q8N139 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
ABCA6Q8N139 USP36-216ENST00000589424 970 ntTSL 5 BASIC32.21■■■□□ 2.75
ABCA6Q8N139 MMD2-204ENST00000612910 778 ntTSL 5 BASIC32.21■■■□□ 2.75
ABCA6Q8N139 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
ABCA6Q8N139 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
ABCA6Q8N139 AP004607.7-201ENST00000527152 1677 ntBASIC32.2■■■□□ 2.75
ABCA6Q8N139 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC32.2■■■□□ 2.75
ABCA6Q8N139 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
ABCA6Q8N139 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC32.2■■■□□ 2.75
ABCA6Q8N139 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC32.2■■■□□ 2.75
ABCA6Q8N139 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
ABCA6Q8N139 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC32.2■■■□□ 2.75
ABCA6Q8N139 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC32.2■■■□□ 2.75
ABCA6Q8N139 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
ABCA6Q8N139 UNC93B4-201ENST00000505679 747 ntBASIC32.2■■■□□ 2.75
ABCA6Q8N139 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC32.2■■■□□ 2.75
ABCA6Q8N139 AC142381.4-202ENST00000563973 229 ntBASIC32.2■■■□□ 2.75
ABCA6Q8N139 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
ABCA6Q8N139 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC32.2■■■□□ 2.75
ABCA6Q8N139 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
ABCA6Q8N139 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
ABCA6Q8N139 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC32.19■■■□□ 2.74
ABCA6Q8N139 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
ABCA6Q8N139 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC32.19■■■□□ 2.74
ABCA6Q8N139 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC32.19■■■□□ 2.74
ABCA6Q8N139 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC32.19■■■□□ 2.74
ABCA6Q8N139 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
ABCA6Q8N139 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
ABCA6Q8N139 AC128676.1-201ENST00000454392 318 ntBASIC32.18■■■□□ 2.74
ABCA6Q8N139 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC32.18■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms