Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM42Q8IWZ5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM42Q8IWZ5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TRIM42Q8IWZ5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.34■■□□□ 1.01
TRIM42Q8IWZ5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM42Q8IWZ5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM42Q8IWZ5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM42Q8IWZ5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 AC104564.3-201ENST00000582367 638 ntBASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM42Q8IWZ5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRIM42Q8IWZ5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM42Q8IWZ5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.33■■□□□ 1
TRIM42Q8IWZ5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRIM42Q8IWZ5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM42Q8IWZ5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM42Q8IWZ5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
TRIM42Q8IWZ5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM42Q8IWZ5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TRIM42Q8IWZ5 AC137630.3-201ENST00000607245 391 ntBASIC21.32■■□□□ 1
TRIM42Q8IWZ5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM42Q8IWZ5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM42Q8IWZ5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM42Q8IWZ5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TRIM42Q8IWZ5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.32■■□□□ 1
TRIM42Q8IWZ5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM42Q8IWZ5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.32■■□□□ 1
TRIM42Q8IWZ5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.31■■□□□ 1
TRIM42Q8IWZ5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TRIM42Q8IWZ5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.3■■□□□ 1
TRIM42Q8IWZ5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.3■■□□□ 1
TRIM42Q8IWZ5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM42Q8IWZ5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM42Q8IWZ5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM42Q8IWZ5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.3■■□□□ 1
TRIM42Q8IWZ5 AF106564.1-201ENST00000607058 2553 ntBASIC21.3■■□□□ 1
TRIM42Q8IWZ5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM42Q8IWZ5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.3■■□□□ 1
TRIM42Q8IWZ5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
TRIM42Q8IWZ5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.3■■□□□ 1
TRIM42Q8IWZ5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM42Q8IWZ5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM42Q8IWZ5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms