Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 Z98882.1-201ENST00000622160 2253 ntBASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CROCCP3Q8IVE0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.43■□□□□ 0.7
CROCCP3Q8IVE0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CROCCP3Q8IVE0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CROCCP3Q8IVE0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CROCCP3Q8IVE0 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.41■□□□□ 0.7
CROCCP3Q8IVE0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CROCCP3Q8IVE0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CROCCP3Q8IVE0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CROCCP3Q8IVE0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.41■□□□□ 0.7
CROCCP3Q8IVE0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.41■□□□□ 0.7
CROCCP3Q8IVE0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CROCCP3Q8IVE0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CROCCP3Q8IVE0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CROCCP3Q8IVE0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CROCCP3Q8IVE0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 AC087742.1-201ENST00000575880 1738 ntBASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 RPS2P7-201ENST00000447334 885 ntBASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 AC131274.2-201ENST00000580697 1507 ntBASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CROCCP3Q8IVE0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.39■□□□□ 0.7
CROCCP3Q8IVE0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 AC016575.1-201ENST00000607026 382 ntBASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CROCCP3Q8IVE0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms