Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK2Q86Y07 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VRK2Q86Y07 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.85■□□□□ 0.77
VRK2Q86Y07 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VRK2Q86Y07 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.85■□□□□ 0.77
VRK2Q86Y07 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK2Q86Y07 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK2Q86Y07 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK2Q86Y07 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
VRK2Q86Y07 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.85■□□□□ 0.77
VRK2Q86Y07 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VRK2Q86Y07 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VRK2Q86Y07 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VRK2Q86Y07 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VRK2Q86Y07 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VRK2Q86Y07 UNC93B3-201ENST00000308076 687 ntBASIC19.84■□□□□ 0.77
VRK2Q86Y07 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.84■□□□□ 0.77
VRK2Q86Y07 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VRK2Q86Y07 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.84■□□□□ 0.77
VRK2Q86Y07 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.84■□□□□ 0.77
VRK2Q86Y07 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.84■□□□□ 0.77
VRK2Q86Y07 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VRK2Q86Y07 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
VRK2Q86Y07 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VRK2Q86Y07 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VRK2Q86Y07 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.83■□□□□ 0.77
VRK2Q86Y07 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.83■□□□□ 0.77
VRK2Q86Y07 AP005435.1-201ENST00000529293 1178 ntBASIC19.83■□□□□ 0.77
VRK2Q86Y07 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.83■□□□□ 0.77
VRK2Q86Y07 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.83■□□□□ 0.76
VRK2Q86Y07 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VRK2Q86Y07 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.83■□□□□ 0.76
VRK2Q86Y07 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
VRK2Q86Y07 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VRK2Q86Y07 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VRK2Q86Y07 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VRK2Q86Y07 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK2Q86Y07 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.82■□□□□ 0.76
VRK2Q86Y07 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK2Q86Y07 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.82■□□□□ 0.76
VRK2Q86Y07 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.82■□□□□ 0.76
VRK2Q86Y07 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK2Q86Y07 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK2Q86Y07 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.82■□□□□ 0.76
VRK2Q86Y07 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.82■□□□□ 0.76
VRK2Q86Y07 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VRK2Q86Y07 MIR4767-201ENST00000582827 78 ntBASIC19.82■□□□□ 0.76
VRK2Q86Y07 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK2Q86Y07 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK2Q86Y07 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.82■□□□□ 0.76
VRK2Q86Y07 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.82■□□□□ 0.76
VRK2Q86Y07 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK2Q86Y07 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK2Q86Y07 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK2Q86Y07 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VRK2Q86Y07 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
VRK2Q86Y07 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VRK2Q86Y07 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VRK2Q86Y07 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VRK2Q86Y07 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VRK2Q86Y07 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
VRK2Q86Y07 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
VRK2Q86Y07 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.81■□□□□ 0.76
VRK2Q86Y07 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VRK2Q86Y07 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VRK2Q86Y07 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VRK2Q86Y07 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VRK2Q86Y07 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VRK2Q86Y07 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VRK2Q86Y07 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VRK2Q86Y07 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VRK2Q86Y07 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VRK2Q86Y07 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.8■□□□□ 0.76
VRK2Q86Y07 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VRK2Q86Y07 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VRK2Q86Y07 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
VRK2Q86Y07 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
VRK2Q86Y07 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VRK2Q86Y07 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VRK2Q86Y07 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.79■□□□□ 0.76
VRK2Q86Y07 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.79■□□□□ 0.76
VRK2Q86Y07 AC024257.2-201ENST00000549699 147 ntBASIC19.79■□□□□ 0.76
VRK2Q86Y07 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.79■□□□□ 0.76
VRK2Q86Y07 AL136162.1-201ENST00000607711 1078 ntBASIC19.79■□□□□ 0.76
VRK2Q86Y07 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.79■□□□□ 0.76
VRK2Q86Y07 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.79■□□□□ 0.76
VRK2Q86Y07 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
VRK2Q86Y07 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
VRK2Q86Y07 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.79■□□□□ 0.76
VRK2Q86Y07 Z98882.1-201ENST00000622160 2253 ntBASIC19.79■□□□□ 0.76
VRK2Q86Y07 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VRK2Q86Y07 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
VRK2Q86Y07 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VRK2Q86Y07 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VRK2Q86Y07 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.79■□□□□ 0.76
VRK2Q86Y07 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VRK2Q86Y07 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VRK2Q86Y07 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VRK2Q86Y07 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
VRK2Q86Y07 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms